MirGeneDB 3.0

MirGeneDB ID

Pcr-Mir-210-P27

Family name MIR-210 (all species)
Seed UGUGCGU
Species Tiger flatworm (Prostheceraeus crozieri )
MiRBase ID
Paralogues Pcr-Mir-210-P26  Pcr-Mir-210-P28 
Orthologues Aca-Mir-210  Agr-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cja-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Dgr-Mir-210  Dma-Mir-210  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Eba-Mir-210  Ebu-Mir-210  Eca-Mir-210  Egr-Mir-210  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Lhy-Mir-210  Llo-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mgi-Mir-210  Mml-Mir-210  Mmr-Mir-210  Mmu-Mir-210  Mom-Mir-210  Mun-Mir-210  Neu-Mir-210  Npo-Mir-210  Oan-Mir-210  Ocu-Mir-210  Ofu-Mir-210  Pab-Mir-210  Pau-Mir-210  Pbv-Mir-210  Pca-Mir-210  Pma-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Sma-Mir-210  Snu-Mir-210  Spt-Mir-210  Tgu-Mir-210  Tni-Mir-210  War-Mir-210  Xtr-Mir-210 
Node of Origin (locus) P. crozeri
Node of Origin (family) Bilateria
Genome context
(GCA_907163375.1_PROCRO_GENOME_genomic)
CAJQUW010002984.1: 11297-11357 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGUAUUCACACUGGGUUAUCAUUGAAACUGAUCGCUGUCUCAACGUUCAUGGAUGCUAAGAAGAAUUCCUUGUGCGUUGUCUCAGUGAUAAUGUUUCGGAGAUGAAGCAACUCUCAAAAAU
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Structure
        10         20        30         40        50          
AGUAUUCACACUGGGUU-   A       UG-|      UCU      U  U  AUGCUAA 
                  AUC UUGAAAC   AUCGCUG   CAACGU CA GG       \
                  UAG GGCUUUG   UAGUGAC   GUUGCG GU CC       G
UAAAAACUCUCAACGAAG   A       UAA^      UCU      U  U  UUAAGAA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Pcr-Mir-210-P27_5p*

mirBase accessionNone
Sequence
0- AUCGCUGUCUCAACGUUCAUGG -22
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Mature sequence

Pcr-Mir-210-P27_3p

mirBase accessionNone
Sequence
39- UUGUGCGUUGUCUCAGUGAUAA -61
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