MirGeneDB ID | Pcr-Mir-9-P37 |
Family name |
MIR-9 (all species) |
Seed |
CUUUGGU |
Species |
Tiger flatworm (Prostheceraeus crozieri ) |
MiRBase ID |
|
Paralogues |
Pcr-Mir-9-P38
|
Orthologues |
Agr-Mir-9
Bfl-Mir-9
Bko-Mir-9
Bla-Mir-9
Bpl-Mir-9
Cin-Mir-9
Cte-Mir-9
Dgr-Mir-9
Eba-Mir-9
Egr-Mir-9
Esc-Mir-9
Gsa-Mir-9
Gsp-Mir-9
Hmi-Mir-9
Hru-Mir-9
Isc-Mir-9
Lan-Mir-9
Lgi-Mir-9
Llo-Mir-9
Mom-Mir-9
Npo-Mir-9
Obi-Mir-9
Ofu-Mir-9
Ovu-Mir-9
Pau-Mir-9
Pdu-Mir-9
Pmi-Mir-9
Pve-Mir-9
Rph-Mir-9
Sma-Mir-9
Snu-Mir-9
Spu-Mir-9
War-Mir-9
Xbo-Mir-9
|
Node of Origin (locus) |
P. crozeri
|
Node of Origin (family) |
Bilateria
|
Genome context (GCA_907163375.1_PROCRO_GENOME_genomic) |
CAJQUW010016298.1: 50141-50205 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CACAUGGAUGAUAAUGAACGGCAGUUGACGUCUUUGGUUAUCUAGCUAUAUGUUCGCAAUUUUGAAGCAAGCAUAAAGCUGGGUUACCAAAGCCACUUUCGCCGUUGGAGCGACAAUCAUAUAGU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CACAUGGAUGAUAAUGA---| AGUUGAC U U A UCGCAAUU
ACGGC G CUUUGGU AUCUAGCU UAUGU \
UGCCG C GAAACCA UGGGUCGA AUACG U
UGAUAUACUAACAGCGAGGU^ CUUUCAC - U A AACGAAGU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Pcr-Mir-9-P37_5p |
mirBase accession | None |
Sequence |
0- UCUUUGGUUAUCUAGCUAUAUGU -23
Get sequence
|
Star sequence |
Pcr-Mir-9-P37_3p* |
mirBase accession | None |
Sequence |
42- AUAAAGCUGGGUUACCAAAGCCA -65
Get sequence
|