MirGeneDB 3.0
MirGeneDB ID

Pcr-Mir-9-P38

Family name MIR-9 (all species)
Seed CUUUGGU
Species Tiger flatworm (Prostheceraeus crozieri )
MiRBase ID
Paralogues Pcr-Mir-9-P37 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) P. crozeri
Node of Origin (family) Bilateria
Genome context
(GCA_907163375.1_PROCRO_GENOME_genomic)		 CAJQUW010001534.1: 327276-327338 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAGAUUUUUGAAGUCUUUCCCUUGCGUAUUUCUUUGGUUAUCUAGCUAUAUGAACGGCUCUACUCAAUUCAUAAAGCUAGGUUACCAAAGUACAUAGCAUUGUCUAAGCAGCGAUAUCAAUGG
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Structure
        10        20          30        40        50        60 
GAGAUUUUUGAAGUCUUUCCCU--|  GUAUUU       U        A     ACGGCUC 
                        UGC      CUUUGGU AUCUAGCU UAUGA       \
                        ACG      GAAACCA UGGAUCGA AUACU       U
GGUAACUAUAGCGACGAAUCUGUU^  AUACAU       U        A     UAACUCA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Pcr-Mir-9-P38_5p
mirBase accessionNone
Sequence 
0- UCUUUGGUUAUCUAGCUAUAUGA -23
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Co-mature sequence

Pcr-Mir-9-P38_3p
mirBase accessionNone
Sequence 
40- AUAAAGCUAGGUUACCAAAGUAC -63
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