MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-92-P1o1

Family name MIR-92 (all species)
Seed AUUGCAC
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID
Paralogues Pma-Mir-92-P1g  Pma-Mir-92-P1h  Pma-Mir-92-P2g 
Orthologues Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) P. marinus
Node of Origin (family) Bilateria
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046125.1: 4120584-4120644 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAACCCUCCUCCUUUGCCGGAGCUCGCGUUGGUCCGGGAUGCGGGGCACUGUUGUGGCAACUCGCGAAUAUUGCACUCGUCCCGGCCAGCGAGAGGCACGGCGCUCUCAUCCACGCCCGC
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Structure
        10          20        30        40         50        60 
GAAACCCUCCUCCUUUG--|  GAG   G      U     AU     -   C    GUGGCA 
                   CCG   CUC CGUUGG CCGGG  GCGGG GCA UGUU      \
                   GGC   GAG GCGACC GGCCC  UGCUC CGU AUAA      A
CGCCCGCACCUACUCUCGC^  ACG   A      -     --     A   U    GCGCUC 
 .       110       100        90           80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-92-P1o1_5p*
mirBase accessionNone
Sequence 
0- UGGUCCGGGAUGCGGGGCACUGUU -24
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Mature sequence

Pma-Mir-92-P1o1_3p
mirBase accessionNone
Sequence 
39- UAUUGCACUCGUCCCGGCCAGC -61
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