MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-12475-P8

Family name MIR-12475 (all species)
Seed AACGCUC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-12475-P1  Sha-Mir-12475-P2a  Sha-Mir-12475-P2b  Sha-Mir-12475-P3  Sha-Mir-12475-P4  Sha-Mir-12475-P5  Sha-Mir-12475-P6  Sha-Mir-12475-P7  Sha-Mir-12475-P9  Sha-Mir-12475-P10  Sha-Mir-12475-P11  Sha-Mir-12475-P12  Sha-Mir-12475-P13  Sha-Mir-12475-P14  Sha-Mir-12475-P15  Sha-Mir-12475-P16  Sha-Mir-12475-P17  Sha-Mir-12475-P18  Sha-Mir-12475-P19  Sha-Mir-12475-P20a  Sha-Mir-12475-P20b  Sha-Mir-12475-P20c  Sha-Mir-12475-P20d  Sha-Mir-12475-P21  Sha-Mir-12475-P22  Sha-Mir-12475-P23  Sha-Mir-12475-P24  Sha-Mir-12475-P25  Sha-Mir-12475-P26  Sha-Mir-12475-P27a1  Sha-Mir-12475-P27a2  Sha-Mir-12475-P27b  Sha-Mir-12475-P27c  Sha-Mir-12475-P28  Sha-Mir-12475-P29  Sha-Mir-12475-P30 
Orthologues
Node of Origin (locus) S. harrisii
Node of Origin (family) Australidelphia
Genome context
(DEVIL_add)		 GL867758.1: 569-628 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCUGCAUUUUGAGUUGCUGAAGUACCACUAAACGCUCUGAAGCCUCAUUGUUGGUAUUAUUCUUGGAACAAUGUGUCUCAGAGUGUUAUGGGCCUUUGGCACCCACAUGAUCUUCCUGA
Get precursor sequence
Structure
        10           20        30        40        50        60
GGCUGCAUUUUGAGUUG---|UG   UA   CUA          AG CU       GGUAUU 
                    C  AAG  CCA   AACGCUCUGA  C  CAUUGUU      A
                    G  UUC  GGU   UUGUGAGACU  G  GUAACAA      U
AGUCCUUCUAGUACACCCAC^GU   CG   A--          CU U-       GGUUCU 
.       110       100        90          80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-12475-P8_5p
mirBase accessionNone
Sequence 
0- AAACGCUCUGAAGCCUCAUUGUU -23
Get sequence
Star sequence

Sha-Mir-12475-P8_3p*
mirBase accessionNone
Sequence 
39- CAAUGUGUCUCAGAGUGUUAU -60
Get sequence