MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7371-o18

Family name MIR-7371 (all species)
Seed AUAAAUU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7371-o1  Sha-Mir-7371-o2  Sha-Mir-7371-o3  Sha-Mir-7371-o4-v1  Sha-Mir-7371-o4-v2  Sha-Mir-7371-o13  Sha-Mir-7371-o14  Sha-Mir-7371-o15  Sha-Mir-7371-o16  Sha-Mir-7371-o17  Sha-Mir-7371-o19  Sha-Mir-7371-o20  Sha-Mir-7371-o24  Sha-Mir-7371-o25  Sha-Mir-7371-o26  Sha-Mir-7371-o27  Sha-Mir-7371-o28  Sha-Mir-7371-P11d  Sha-Mir-7371-P11e  Sha-Mir-7371-P12a  Sha-Mir-7371-P12b  Sha-Mir-7371-P13  Sha-Mir-7371-P15  Sha-Mir-7371-P17  Sha-Mir-7371-P18  Sha-Mir-7371-P19-v1  Sha-Mir-7371-P19-v2  Sha-Mir-7371-P20  Sha-Mir-7371-P25  Sha-Mir-7371-P28a  Sha-Mir-7371-P28b  Sha-Mir-7371-P29  Sha-Mir-7371-P39 
Orthologues Mdo-Mir-7371-P18  Neu-Mir-7371-P18 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867599.1: 284786-284845 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCCUAUAGCUAGCCUGCUCAGCAGCCCCGCUUGGAUAAGGUAUUCUUAUUUUUUGAAUUUUUCCAAAAUAAAUUACCUUAUCCUUGGAGGCCAUUGAGAGACAACUUCCCAGCUAAAC
Get precursor sequence
Structure
        10          20         30        40        50        60
CAGCCUAUAGCUAGCCUG--     CA   -|  CUU          UUC      UUUGAA 
                    CUCAG  GCC CCG   GGAUAAGGUA   UUAUUU      U
                    GAGUU  CGG GGU   CCUAUUCCAU   AAUAAA      U
CAAAUCGACCCUUCAACAGA     AC   A^  U--          UA-      ACCUUU 
.       110       100        90          80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7371-o18_5p*
mirBase accessionNone
Sequence 
0- GCUUGGAUAAGGUAUUCUUAUUU -23
Get sequence
Mature sequence

Sha-Mir-7371-o18_3p
mirBase accessionNone
Sequence 
38- AAUAAAUUACCUUAUCCUUGGA -60
Get sequence