MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7371-o20

Family name MIR-7371 (all species)
Seed UCUGAUA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7371-o1  Sha-Mir-7371-o2  Sha-Mir-7371-o3  Sha-Mir-7371-o4-v1  Sha-Mir-7371-o4-v2  Sha-Mir-7371-o13  Sha-Mir-7371-o14  Sha-Mir-7371-o15  Sha-Mir-7371-o16  Sha-Mir-7371-o17  Sha-Mir-7371-o18  Sha-Mir-7371-o19  Sha-Mir-7371-o24  Sha-Mir-7371-o25  Sha-Mir-7371-o26  Sha-Mir-7371-o27  Sha-Mir-7371-o28  Sha-Mir-7371-P11d  Sha-Mir-7371-P11e  Sha-Mir-7371-P12a  Sha-Mir-7371-P12b  Sha-Mir-7371-P13  Sha-Mir-7371-P15  Sha-Mir-7371-P17  Sha-Mir-7371-P18  Sha-Mir-7371-P19-v1  Sha-Mir-7371-P19-v2  Sha-Mir-7371-P20  Sha-Mir-7371-P25  Sha-Mir-7371-P28a  Sha-Mir-7371-P28b  Sha-Mir-7371-P29  Sha-Mir-7371-P39 
Orthologues Mdo-Mir-7371-P20  Neu-Mir-7371-P20 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867599.1: 288456-288512 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAAGUCAACUAUACUGCCUAGUAGCCCCCCUCUGAUAAGGCAUUCUAUUUUCUGAUUAUUGGCAAAAUAGACACCUUAUCCUAGGGGGCUGUUGGGAAAGAACUUCUGUGCAGACA
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Structure
        10           20        30        40        50        
GAAAGUCAACUAUACUG---|            CUCU       CAU        CUGAU 
                    CCUAGUAGCCCCC    GAUAAGG   UCUAUUUU     U
                    GGGUUGUCGGGGG    CUAUUCC   AGAUAAAA     A
ACAGACGUGUCUUCAAGAAA^            AUC-       AC-        CGGUU 
     110       100        90         80         70        60
Deep sequencing
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CommentThere is a second Drosha cut -1 on the 5p arm.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-7371-o20_5p
mirBase accessionNone
Sequence 
0- CUCUGAUAAGGCAUUCUAUUUU -22
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Co-mature sequence

Sha-Mir-7371-o20_3p
mirBase accessionNone
Sequence 
36- AAUAGACACCUUAUCCUAGGG -57
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