MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7371-o28

Family name MIR-7371 (all species)
Seed GUCGUCA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7371-o1  Sha-Mir-7371-o2  Sha-Mir-7371-o3  Sha-Mir-7371-o4-v1  Sha-Mir-7371-o4-v2  Sha-Mir-7371-o13  Sha-Mir-7371-o14  Sha-Mir-7371-o15  Sha-Mir-7371-o16  Sha-Mir-7371-o17  Sha-Mir-7371-o18  Sha-Mir-7371-o19  Sha-Mir-7371-o20  Sha-Mir-7371-o24  Sha-Mir-7371-o25  Sha-Mir-7371-o26  Sha-Mir-7371-o27  Sha-Mir-7371-P11d  Sha-Mir-7371-P11e  Sha-Mir-7371-P12a  Sha-Mir-7371-P12b  Sha-Mir-7371-P13  Sha-Mir-7371-P15  Sha-Mir-7371-P17  Sha-Mir-7371-P18  Sha-Mir-7371-P19-v1  Sha-Mir-7371-P19-v2  Sha-Mir-7371-P20  Sha-Mir-7371-P25  Sha-Mir-7371-P28a  Sha-Mir-7371-P28b  Sha-Mir-7371-P29  Sha-Mir-7371-P39 
Orthologues Mdo-Mir-7371-P28a  Mdo-Mir-7371-P28b  Neu-Mir-7371-P28a  Neu-Mir-7371-P28b 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867599.1: 336354-336413 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUCCUACCAUCCUUCCUUCCAUUUGCCUCAGCUGUACAAAUGUGACAUUUUAUAGAUAAUAAUAAAGUCGUCAUAUUAUGUGCAGCAGUGGCAGUGGGAGAUAAGCCUUCCAGACAGAC
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Structure
        10           20        30         40         50        
UCUCCUACCAUCCUUCC---     U     UCA        -        -|    AUAGA 
                    UUCCA UUGCC   GCUGUACA AAUGUGAC AUUUU     U
                    AGGGU GACGG   CGACGUGU UUAUACUG UGAAA     A
CAGACAGACCUUCCGAAUAG     -     UGA        A        C^    UAAUA 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7371-o28_5p*
mirBase accessionNone
Sequence 
0- AGCUGUACAAAUGUGACAUUUU -22
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Mature sequence

Sha-Mir-7371-o28_3p
mirBase accessionNone
Sequence 
36- AGUCGUCAUAUUAUGUGCAGCAGU -60
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