MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7371-P28a

Family name MIR-7371 (all species)
Seed CUCGGAU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7371-o1  Sha-Mir-7371-o2  Sha-Mir-7371-o3  Sha-Mir-7371-o4-v1  Sha-Mir-7371-o4-v2  Sha-Mir-7371-o13  Sha-Mir-7371-o14  Sha-Mir-7371-o15  Sha-Mir-7371-o16  Sha-Mir-7371-o17  Sha-Mir-7371-o18  Sha-Mir-7371-o19  Sha-Mir-7371-o20  Sha-Mir-7371-o24  Sha-Mir-7371-o25  Sha-Mir-7371-o26  Sha-Mir-7371-o27  Sha-Mir-7371-o28  Sha-Mir-7371-P11d  Sha-Mir-7371-P11e  Sha-Mir-7371-P12a  Sha-Mir-7371-P12b  Sha-Mir-7371-P13  Sha-Mir-7371-P15  Sha-Mir-7371-P17  Sha-Mir-7371-P18  Sha-Mir-7371-P19-v1  Sha-Mir-7371-P19-v2  Sha-Mir-7371-P20  Sha-Mir-7371-P25  Sha-Mir-7371-P28b  Sha-Mir-7371-P29  Sha-Mir-7371-P39 
Orthologues Mdo-Mir-7371-P28a  Neu-Mir-7371-P28a 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867599.1: 291545-291603 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCUGCGACUAUCCCUUACCAUCAGACUUACUCGGAUAAGGCACUCUAUUUUGUGGAUUCUACCAAAAUAAAUGCCUUGUCCUUGGGAGGCUGUUGGGAAAGAAGACUUUUGGAUUGA
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Structure
        10          20        30          40        50         
CUCCUGCGACUAUCCCUUA--|  U   A   A   --          CUC      GUGGA 
                     CCA CAG CUU CUC  GGAUAAGGCA   UAUUUU     U
                     GGU GUC GGA GGG  CCUGUUCCGU   AUAAAA     U
AGUUAGGUUUUCAGAAGAAAG^  U   -   -   UU          AA-      CCAUC 
       110       100         90         80         70        60
Deep sequencing
3' NTU Yes
MotifsUGUG in loop
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-7371-P28a_5p
mirBase accessionNone
Sequence 
0- ACUCGGAUAAGGCACUCUAUUUU -23
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Star sequence

Sha-Mir-7371-P28a_3p*
mirBase accessionNone
Sequence 
37- AAUAAAUGCCUUGUCCUUGGGA -59
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