MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7371-P28b

Family name MIR-7371 (all species)
Seed CUCGGAU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7371-o1  Sha-Mir-7371-o2  Sha-Mir-7371-o3  Sha-Mir-7371-o4-v1  Sha-Mir-7371-o4-v2  Sha-Mir-7371-o13  Sha-Mir-7371-o14  Sha-Mir-7371-o15  Sha-Mir-7371-o16  Sha-Mir-7371-o17  Sha-Mir-7371-o18  Sha-Mir-7371-o19  Sha-Mir-7371-o20  Sha-Mir-7371-o24  Sha-Mir-7371-o25  Sha-Mir-7371-o26  Sha-Mir-7371-o27  Sha-Mir-7371-o28  Sha-Mir-7371-P11d  Sha-Mir-7371-P11e  Sha-Mir-7371-P12a  Sha-Mir-7371-P12b  Sha-Mir-7371-P13  Sha-Mir-7371-P15  Sha-Mir-7371-P17  Sha-Mir-7371-P18  Sha-Mir-7371-P19-v1  Sha-Mir-7371-P19-v2  Sha-Mir-7371-P20  Sha-Mir-7371-P25  Sha-Mir-7371-P28a  Sha-Mir-7371-P29  Sha-Mir-7371-P39 
Orthologues Mdo-Mir-7371-P28b  Neu-Mir-7371-P28b 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867599.1: 291681-291739 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUCCUGCCACCAUUCCUUCCAGUCGCCCCACUCGGAUAAGGCACUCUAUUUUGUGAAUUCUAUCAAAAUAAAUUACCUUAUCCUUGGAGGCUGUUGAGAAUGAACUCUCUAGCCCAAC
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Structure
        10         20          30        40        50         
AGUCCUGCCACCAUUCC-   -   UC   -|  CUC        CACUC      GUGAA 
                  UUC CAG  GCC CCA   GGAUAAGG     UAUUUU     U
                  AAG GUU  CGG GGU   CCUAUUCC     AUAAAA     U
CAACCCGAUCUCUCAAGU   A   GU   A^  U--        AUUAA      CUAUC 
       110       100        90          80        70        60
Deep sequencing
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-7371-P28b_5p
mirBase accessionNone
Sequence 
0- ACUCGGAUAAGGCACUCUAUUUU -23
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Star sequence

Sha-Mir-7371-P28b_3p*
mirBase accessionNone
Sequence 
37- AAUAAAUUACCUUAUCCUUGGA -59
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