MirGeneDB ID | Sha-Mir-7371-P12a |
Family name |
MIR-7371 (all species) |
Seed |
AAUGAGC |
Species |
Tasmanian devil (Sarcophilus harrisii) |
MiRBase ID |
|
Paralogues |
Sha-Mir-7371-o1
Sha-Mir-7371-o2
Sha-Mir-7371-o3
Sha-Mir-7371-o4-v1
Sha-Mir-7371-o4-v2
Sha-Mir-7371-o13
Sha-Mir-7371-o14
Sha-Mir-7371-o15
Sha-Mir-7371-o16
Sha-Mir-7371-o17
Sha-Mir-7371-o18
Sha-Mir-7371-o19
Sha-Mir-7371-o20
Sha-Mir-7371-o24
Sha-Mir-7371-o25
Sha-Mir-7371-o26
Sha-Mir-7371-o27
Sha-Mir-7371-o28
Sha-Mir-7371-P11d
Sha-Mir-7371-P11e
Sha-Mir-7371-P12b
Sha-Mir-7371-P13
Sha-Mir-7371-P15
Sha-Mir-7371-P17
Sha-Mir-7371-P18
Sha-Mir-7371-P19-v1
Sha-Mir-7371-P19-v2
Sha-Mir-7371-P20
Sha-Mir-7371-P25
Sha-Mir-7371-P28a
Sha-Mir-7371-P28b
Sha-Mir-7371-P29
Sha-Mir-7371-P39
|
Orthologues |
Mdo-Mir-7371-P12
Neu-Mir-7371-P12a
|
Node of Origin (locus) |
Australidelphia
|
Node of Origin (family) |
Marsupialia
|
Genome context (DEVIL_add) |
GL867599.1: 265411-265466 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCUCAUACUGCCAUCCCUUCCCACUGCCUCAGCUGGAUAAGGUACUCUAUUGUACAUGCUGUCAAAAUGAGCACCUUAUCCAUAGAGGCUGUUGGCAAAGAACUUCUAAGCUAAAC
Get precursor sequence
|
Structure | 10 20 30 40 50
UCUCAUACUGCCAUCCCUU--| C U AGC A UA- UACA
CC AC GCCUC UGGAUAAGGU CUC UUG U
GG UG CGGAG ACCUAUUCCA GAG AAC G
CAAAUCGAAUCUUCAAGAAAC^ U U AU- C UAA UGUC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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Star sequence |
Sha-Mir-7371-P12a_5p* |
mirBase accession | None |
Sequence |
0- AGCUGGAUAAGGUACUCUAUUG -22
Get sequence
|
Mature sequence |
Sha-Mir-7371-P12a_3p |
mirBase accession | None |
Sequence |
34- AAAUGAGCACCUUAUCCAUAGA -56
Get sequence
|