Mir-7371-P19-v1

MirGeneDB ID

Sha-Mir-7371-P19-v1

Family name

MIR-7371 (all species)

Seed

CUUGGAU

Species

Tasmanian devil (Sarcophilus harrisii)

MiRBase ID

Paralogues

Sha-Mir-7371-o1 Sha-Mir-7371-o2 Sha-Mir-7371-o3 Sha-Mir-7371-o4-v1 Sha-Mir-7371-o4-v2 Sha-Mir-7371-o13 Sha-Mir-7371-o14 Sha-Mir-7371-o15 Sha-Mir-7371-o16 Sha-Mir-7371-o17 Sha-Mir-7371-o18 Sha-Mir-7371-o19 Sha-Mir-7371-o20 Sha-Mir-7371-o24 Sha-Mir-7371-o25 Sha-Mir-7371-o26 Sha-Mir-7371-o27 Sha-Mir-7371-o28 Sha-Mir-7371-P11d Sha-Mir-7371-P11e Sha-Mir-7371-P12a Sha-Mir-7371-P12b Sha-Mir-7371-P13 Sha-Mir-7371-P15 Sha-Mir-7371-P17 Sha-Mir-7371-P18 Sha-Mir-7371-P19-v2 Sha-Mir-7371-P20 Sha-Mir-7371-P25 Sha-Mir-7371-P28a Sha-Mir-7371-P28b Sha-Mir-7371-P29 Sha-Mir-7371-P39

Orthologues

Mdo-Mir-7371-P19-v1 Mdo-Mir-7371-P19-v2 Neu-Mir-7371-P19-v1 Neu-Mir-7371-P19-v2

Node of Origin (locus)

Marsupialia

Node of Origin (family)

Marsupialia

Genome context
(DEVIL_add)

GL867599.1: 274758-274815 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UAUCCUACCCUGAUCACCUCCAGCAGCCUCACUUGGAUAAAGUGCUUUAUUUUGUGGAUAAUGCUGAAAUAAGGACUUUAUCCAUGGAAGCUGUUGGCAUGGACCAUUCAGCCAAACC

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Structure

        10          20        30        40        50         
UAUCCUACCCUGAUCACCU--|       C  ACU          G         GUGGA 
                     CCAGCAGC UC   UGGAUAAAGU CUUUAUUUU     U
                     GGUUGUCG AG   ACCUAUUUCA GGAAUAAAG     A
CCAAACCGACUUACCAGGUAC^       A  GU-          -         UCGUA 
      110       100        90         80         70        60

Deep sequencing

3' NTU

Yes

Motifs

UGUG in loop

Tissue expression

Bo	Br	He	Ki	Li	Ly	Pa	Sk	Sp	Te

Mature sequence

Sha-Mir-7371-P19-v1_5p

mirBase accession

None

Sequence

0- ACUUGGAUAAAGUGCUUUAUUUU -23

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Co-mature sequence

Sha-Mir-7371-P19-v1_3p

mirBase accession

None

Sequence

37- AAUAAGGACUUUAUCCAUGGA -58

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