Mir-7371-P19-v1

MirGeneDB ID

Neu-Mir-7371-P19-v1

Family name

MIR-7371 (all species)

Seed

AUAAGGA

Species

Tammar Wallaby (Notamacropus eugenii)

MiRBase ID

Paralogues

Neu-Mir-7371-o29 Neu-Mir-7371-o30 Neu-Mir-7371-o31-v1 Neu-Mir-7371-o31-v2 Neu-Mir-7371-o32-v1 Neu-Mir-7371-o32-v2 Neu-Mir-7371-o33 Neu-Mir-7371-P11 Neu-Mir-7371-P12a Neu-Mir-7371-P12b Neu-Mir-7371-P15 Neu-Mir-7371-P17 Neu-Mir-7371-P18 Neu-Mir-7371-P19-v2 Neu-Mir-7371-P20 Neu-Mir-7371-P24 Neu-Mir-7371-P25 Neu-Mir-7371-P28a Neu-Mir-7371-P28b Neu-Mir-7371-P29 Neu-Mir-7371-P39

Orthologues

Mdo-Mir-7371-P19-v1 Mdo-Mir-7371-P19-v2 Sha-Mir-7371-o19 Sha-Mir-7371-P19-v1 Sha-Mir-7371-P19-v2

Node of Origin (locus)

Marsupialia

Node of Origin (family)

Marsupialia

Genome context
(GCA_028372415.1_mMacEug1.pri)

CM051820.1: 70679057-70679114 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UGUCCUACCAUUACCACCUCCAGCAGCCUCACUUGGAUAAAGUGCUUUAUUUUGUGAAUAGUGCUGAAAUAAGGACUUUAUCCAUGGAAGCUGUUGGCAAGGACCAUUCAGCCAAACC

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Structure

        10          20        30        40        50         
UGUCCUACCAUUACCACCU--|       C  ACU          G         GUGAA 
                     CCAGCAGC UC   UGGAUAAAGU CUUUAUUUU     U
                     GGUUGUCG AG   ACCUAUUUCA GGAAUAAAG     A
CCAAACCGACUUACCAGGAAC^       A  GU-          -         UCGUG 
      110       100        90         80         70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UGUG in loop

Tissue expression

Br	Ce	Fi	Li	Mi	Mi	Mi	Mi	Mi	Ov	Se	Se	Te	Te	Te

Star sequence

Neu-Mir-7371-P19-v1_5p*

mirBase accession

None

Sequence

0- ACUUGGAUAAAGUGCUUUAUUUU -23

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Mature sequence

Neu-Mir-7371-P19-v1_3p

mirBase accession

None

Sequence

37- AAUAAGGACUUUAUCCAUGGA -58

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