MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-7371-o32-v1

Family name MIR-7371 (all species)
Seed CUUUGUA
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-7371-o29  Neu-Mir-7371-o30  Neu-Mir-7371-o31-v1  Neu-Mir-7371-o31-v2  Neu-Mir-7371-o32-v2  Neu-Mir-7371-o33  Neu-Mir-7371-P11  Neu-Mir-7371-P12a  Neu-Mir-7371-P12b  Neu-Mir-7371-P15  Neu-Mir-7371-P17  Neu-Mir-7371-P18  Neu-Mir-7371-P19-v1  Neu-Mir-7371-P19-v2  Neu-Mir-7371-P20  Neu-Mir-7371-P24  Neu-Mir-7371-P25  Neu-Mir-7371-P28a  Neu-Mir-7371-P28b  Neu-Mir-7371-P29  Neu-Mir-7371-P39 
Orthologues Mdo-Mir-7371-P32 
Node of Origin (locus) N. eugenii
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051820.1: 69280803-69280863 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUGUCUCAAUCUCUUUCCUCCACGUGCUCCCUUUGUAUCAGAGACUGUCUUGUGUGGAUGUCAUCAAAGAUAGGAUCUGUACAAAGGUGGUGCUUGGGGUACCACACUCUCUUUUUGAAU
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Structure
        10           20        30        40        50          
AUUGUCUCAAUCUCUUUC---|    C UG UC        U    GA       GUGUGGA 
                     CUCCA G  C  CCUUUGUA CAGA  CUGUCUU       \
                     GGGGU C  G  GGAAACAU GUCU  GAUAGAA       U
UAAGUUUUUCUCUCACACCAU^    U GU GU        -    AG       ACUACUG 
 .       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-7371-o32-v1_5p

mirBase accessionNone
Sequence
0- CCUUUGUAUCAGAGACUGUCUU -22
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Star sequence

Neu-Mir-7371-o32-v1_3p*

mirBase accessionNone
Sequence
40- AUAGGAUCUGUACAAAGGUGG -61
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