MirGeneDB ID | Neu-Mir-7371-P25 |
---|---|
Family name | MIR-7371 (all species) |
Seed | ACGUUGC |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | Neu-Mir-7371-o29 Neu-Mir-7371-o30 Neu-Mir-7371-o31-v1 Neu-Mir-7371-o31-v2 Neu-Mir-7371-o32-v1 Neu-Mir-7371-o32-v2 Neu-Mir-7371-o33 Neu-Mir-7371-P11 Neu-Mir-7371-P12a Neu-Mir-7371-P12b Neu-Mir-7371-P15 Neu-Mir-7371-P17 Neu-Mir-7371-P18 Neu-Mir-7371-P19-v1 Neu-Mir-7371-P19-v2 Neu-Mir-7371-P20 Neu-Mir-7371-P24 Neu-Mir-7371-P28a Neu-Mir-7371-P28b Neu-Mir-7371-P29 Neu-Mir-7371-P39 |
Orthologues | Mdo-Mir-7371-P25 Sha-Mir-7371-o25 Sha-Mir-7371-P25 |
Node of Origin (locus) | Marsupialia |
Node of Origin (family) | Marsupialia |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 70689389-70689447 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | AAAGACACCAAAAUGCCUUCCAUGUGCCCCAGUUGUACCAGAUGCUCGAUUUUCUAGAUUUUAUGAAACGUUGCAUCUUGUACAACAGUGGCUCUUGGAGAAAACUUCCAACCUGACAAGet precursor sequence |
Structure | 10 20 30 40 50 AAAGACACCAAAAUGCC-- UGU CCA C U-| A UCUAG UUCCA GCC GUUGUAC AGAUGC CG UUU A GAGGU CGG CAACAUG UCUACG GC AAG U AACAGUCCAACCUUCAAAA UCU UGA U UU^ A UAUUU 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | Yes |
Motifs | CNNC at 3p(+17) |
Star sequence | Neu-Mir-7371-P25_5p* |
mirBase accession | None |
Sequence |
0- AGUUGUACCAGAUGCUCGAUUUU -23
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|
Mature sequence | Neu-Mir-7371-P25_3p |
mirBase accession | None |
Sequence |
36- AACGUUGCAUCUUGUACAACAGU -59
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|