MirGeneDB ID | Neu-Mir-7371-P28b |
---|---|
Family name | MIR-7371 (all species) |
Seed | CUCGGAU |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | Neu-Mir-7371-o29 Neu-Mir-7371-o30 Neu-Mir-7371-o31-v1 Neu-Mir-7371-o31-v2 Neu-Mir-7371-o32-v1 Neu-Mir-7371-o32-v2 Neu-Mir-7371-o33 Neu-Mir-7371-P11 Neu-Mir-7371-P12a Neu-Mir-7371-P12b Neu-Mir-7371-P15 Neu-Mir-7371-P17 Neu-Mir-7371-P18 Neu-Mir-7371-P19-v1 Neu-Mir-7371-P19-v2 Neu-Mir-7371-P20 Neu-Mir-7371-P24 Neu-Mir-7371-P25 Neu-Mir-7371-P28a Neu-Mir-7371-P29 Neu-Mir-7371-P39 |
Orthologues | Mdo-Mir-7371-P28b Sha-Mir-7371-o28 Sha-Mir-7371-P28b |
Node of Origin (locus) | Marsupialia |
Node of Origin (family) | Marsupialia |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 70692577-70692635 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | GCCUGCUACUAUCACCCUUCCAAUCGCCCCACUCGGAUAAGGCACUCUAUUUUGUGAAUUCUAUCAAAAUAAAUUACCUUAUCCUUGGAGGCUGUUGAGAAAGAACUCUCUAGCCCAACGet precursor sequence |
Structure | 10 20 30 40 50 GCCUGCUACUAUCACCC- - C -| CUC CACUC GUGAA UUC CAAU GCC CCA GGAUAAGG UAUUUU U AAG GUUG CGG GGU CCUAUUCC AUAAAA U CAACCCGAUCUCUCAAGA A U A^ U-- AUUAA CUAUC 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | No |
Motifs | UGUG in loop |
Mature sequence | Neu-Mir-7371-P28b_5p |
mirBase accession | None |
Sequence |
0- ACUCGGAUAAGGCACUCUAUUUU -23
Get sequence
|
Star sequence | Neu-Mir-7371-P28b_3p* |
mirBase accession | None |
Sequence |
37- AAUAAAUUACCUUAUCCUUGGA -59
Get sequence
|