MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-7371-P15

Family name MIR-7371 (all species)
Seed UGAUACA
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-7371-o29  Neu-Mir-7371-o30  Neu-Mir-7371-o31-v1  Neu-Mir-7371-o31-v2  Neu-Mir-7371-o32-v1  Neu-Mir-7371-o32-v2  Neu-Mir-7371-o33  Neu-Mir-7371-P11  Neu-Mir-7371-P12a  Neu-Mir-7371-P12b  Neu-Mir-7371-P17  Neu-Mir-7371-P18  Neu-Mir-7371-P19-v1  Neu-Mir-7371-P19-v2  Neu-Mir-7371-P20  Neu-Mir-7371-P24  Neu-Mir-7371-P25  Neu-Mir-7371-P28a  Neu-Mir-7371-P28b  Neu-Mir-7371-P29  Neu-Mir-7371-P39 
Orthologues Mdo-Mir-7371-P15  Sha-Mir-7371-o15  Sha-Mir-7371-P15 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051820.1: 70672905-70672960 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCUCCUGCACUGCGCCCUCCUUCUGCCUCAGUUGUACCAGAUGUUCCAUUUUCUAUAUAAUAAAUGAUACAUCUAGUGCAACAGUGGCCGGUGGAGAAGAACUUCAGAGACAGAG
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Structure
        10          20        30        40        50       
UUCUCCUGCACUGCGCC--|   U  U   UCA       C      UC     UCUA 
                   CUCC UC GCC   GUUGUAC AGAUGU  CAUUU    U
                   GAGG GG CGG   CAACGUG UCUACA  GUAAA    A
GAGACAGAGACUUCAAGAA^   U  C   UGA       A      UA     UAAU 
    110       100        90        80        70        60
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Star sequence

Neu-Mir-7371-P15_5p* (predicted)

mirBase accessionNone
Sequence
0- AGUUGUACCAGAUGUUCCAUUU -22
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Mature sequence

Neu-Mir-7371-P15_3p

mirBase accessionNone
Sequence
34- AUGAUACAUCUAGUGCAACAGU -56
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