Mir-7371-P12b

MirGeneDB ID

Sha-Mir-7371-P12b

Family name

MIR-7371 (all species)

Seed

AAUGAGG

Species

Tasmanian devil (Sarcophilus harrisii)

MiRBase ID

Paralogues

Sha-Mir-7371-o1 Sha-Mir-7371-o2 Sha-Mir-7371-o3 Sha-Mir-7371-o4-v1 Sha-Mir-7371-o4-v2 Sha-Mir-7371-o13 Sha-Mir-7371-o14 Sha-Mir-7371-o15 Sha-Mir-7371-o16 Sha-Mir-7371-o17 Sha-Mir-7371-o18 Sha-Mir-7371-o19 Sha-Mir-7371-o20 Sha-Mir-7371-o24 Sha-Mir-7371-o25 Sha-Mir-7371-o26 Sha-Mir-7371-o27 Sha-Mir-7371-o28 Sha-Mir-7371-P11d Sha-Mir-7371-P11e Sha-Mir-7371-P12a Sha-Mir-7371-P13 Sha-Mir-7371-P15 Sha-Mir-7371-P17 Sha-Mir-7371-P18 Sha-Mir-7371-P19-v1 Sha-Mir-7371-P19-v2 Sha-Mir-7371-P20 Sha-Mir-7371-P25 Sha-Mir-7371-P28a Sha-Mir-7371-P28b Sha-Mir-7371-P29 Sha-Mir-7371-P39

Orthologues

Mdo-Mir-7371-P12 Neu-Mir-7371-P12b

Node of Origin (locus)

Australidelphia

Node of Origin (family)

Marsupialia

Genome context
(DEVIL_add)

GL867599.1: 268115-268171 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CAAAGAGAAAAGUAAUUUUACAACUGCCUCAGUUGGUUAAGAUUCUCUUUUUGUAGAUCUUGUCAAAAUGAGGAUCCUAGCCAUAGAGGCUGUUGGGAAAGAACUUUGCAGUCAAGC

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Structure

        10        20          30        40        50        
CAAAGAGAAAAGUAAUUUUA--|   U     AGU      A       U     UAGA 
                      CAAC GCCUC   UGGUUA GAUUCUC UUUUG    U
                      GUUG CGGAG   ACCGAU CUAGGAG AAAAC    C
CGAACUGACGUUUCAAGAAAGG^   U     AU-      C       U     UGUU 
     110       100        90         80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

Bo	Br	He	Ki	Li	Ly	Pa	Sk	Sp	Te

Star sequence

Sha-Mir-7371-P12b_5p*

mirBase accession

None

Sequence

0- AGUUGGUUAAGAUUCUCUUUUUG -23

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Mature sequence

Sha-Mir-7371-P12b_3p

mirBase accession

None

Sequence

35- AAAUGAGGAUCCUAGCCAUAGA -57

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