MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7398-o9

Family name MIR-7398 (all species)
Seed GUGUAGA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7398-o5  Sha-Mir-7398-o6  Sha-Mir-7398-o7  Sha-Mir-7398-o8  Sha-Mir-7398-o13  Sha-Mir-7398-o14  Sha-Mir-7398-P5e  Sha-Mir-7398-P5f  Sha-Mir-7398-P9d-v1  Sha-Mir-7398-P9d-v2  Sha-Mir-7398-P9e-v1  Sha-Mir-7398-P9e-v2  Sha-Mir-7398-P21  Sha-Mir-7398-P24c-v1  Sha-Mir-7398-P24c-v2  Sha-Mir-7398-P24d-v1  Sha-Mir-7398-P24d-v2 
Orthologues Mdo-Mir-7398-P9a-v1  Mdo-Mir-7398-P9a-v2  Mdo-Mir-7398-P9b  Neu-Mir-7398-P9f  Neu-Mir-7398-P9g 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867608.1: 2092125-2092182 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCUGUUCUUUGACCUCCAAGUGCCCGACUGUGUAGAGGUGGGAAAGAUGCUGUUAUUUCUCAGCAAAAUUUCUUGUCUCUCUCUGUCGAGCAUCUAGGACUCUGCUGCCGGCCCCU
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Structure
        10         20         30        40         50        
CUCCUGUUCUUUGACCU-  A  -|  C    UGUGU     UG     GA-   UGUUA 
                  CC AG UGC CGAC     AGAGG  GGAAA   UGC     U
                  GG UC ACG GCUG     UCUCU  UCUUU   ACG     U
UCCCCGGCCGUCGUCUCA  A  U^  A    UCUC-     GU     AAA   ACUCU 
      110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-7398-o9_5p
mirBase accessionNone
Sequence 
0- UGUGUAGAGGUGGGAAAGAUGC -22
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Co-mature sequence

Sha-Mir-7398-o9_3p
mirBase accessionNone
Sequence 
36- AAAAUUUCUUGUCUCUCUCUGU -58
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