MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7398-o13

Family name MIR-7398 (all species)
Seed AACCCUC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7398-o5  Sha-Mir-7398-o6  Sha-Mir-7398-o7  Sha-Mir-7398-o8  Sha-Mir-7398-o9  Sha-Mir-7398-o14  Sha-Mir-7398-P5e  Sha-Mir-7398-P5f  Sha-Mir-7398-P9d-v1  Sha-Mir-7398-P9d-v2  Sha-Mir-7398-P9e-v1  Sha-Mir-7398-P9e-v2  Sha-Mir-7398-P21  Sha-Mir-7398-P24c-v1  Sha-Mir-7398-P24c-v2  Sha-Mir-7398-P24d-v1  Sha-Mir-7398-P24d-v2 
Orthologues Mdo-Mir-7398-P13  Neu-Mir-7398-o13 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867608.1: 2103168-2103224 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUUGACCUUCCUCCUCCAGAUGCCCCACUGUUGAAAAGGGUGAGGGUACCGUGCACUAUCGGGUAACCCUCCCUUCUUUCACAGUGGAGCAGCUAGGACUCUUCUUCCAGACCCA
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Structure
        10          20        30         40         50        
UCUUUGACCUUCCUCCU-  -| A   C       U    -    U      -   GUGCA 
                  CC AG UGC CCACUGU GAAA AGGG GAGGGU ACC     \
                  GG UC ACG GGUGACA CUUU UUCC CUCCCA UGG     C
ACCCAGACCUUCUUCUCA  A^ G   A       -    C    -      A   GCUAU 
     110       100        90         80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7398-o13_5p*
mirBase accessionNone
Sequence 
0- UGUUGAAAAGGGUGAGGGUACC -22
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Mature sequence

Sha-Mir-7398-o13_3p
mirBase accessionNone
Sequence 
35- UAACCCUCCCUUCUUUCACAGU -57
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