| MirGeneDB ID | Sha-Mir-7398-P9e-v1 |
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| Family name |
MIR-7398 (all species) |
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| Seed |
UGUGUAG |
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| Species |
Tasmanian devil (Sarcophilus harrisii) |
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| MiRBase ID |
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| Paralogues |
Sha-Mir-7398-o5
Sha-Mir-7398-o6
Sha-Mir-7398-o7
Sha-Mir-7398-o8
Sha-Mir-7398-o9
Sha-Mir-7398-o13
Sha-Mir-7398-o14
Sha-Mir-7398-P5e
Sha-Mir-7398-P5f
Sha-Mir-7398-P9d-v1
Sha-Mir-7398-P9d-v2
Sha-Mir-7398-P9e-v2
Sha-Mir-7398-P21
Sha-Mir-7398-P24c-v1
Sha-Mir-7398-P24c-v2
Sha-Mir-7398-P24d-v1
Sha-Mir-7398-P24d-v2
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| Orthologues |
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| Node of Origin (locus) |
S. harrisii
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| Node of Origin (family) |
Marsupialia
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Genome context
(DEVIL_add) |
GL867608.1: 2082124-2082184 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCUCCUUUUCUUUCACCUCCAGGUGCCCAAUUGUGUAGAGGUAAGAAAUAUGCUGUGUUCUUGGUUGGUAUAUUUCUUGCCUCUACCAAUUGAGCAUAUUGGACUUGGCUGCUGCCCUUUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UCUCCUUUUCUUUCACC- -| C U UGUGUU
UCCAG GUGC CAAUUG GUAGAGGUAAGAAAUAUGC C
AGGUU UACG GUUAAC CAUCUCCGUUCUUUAUAUG U
GUUUCCCGUCGUCGGUUC A^ A - GUUGGU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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| Mature sequence |
Sha-Mir-7398-P9e-v1_5p |
| mirBase accession | None |
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| Sequence |
0- UUGUGUAGAGGUAAGAAAUAUGC -23
Get sequence
|
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| Star sequence |
Sha-Mir-7398-P9e-v1_3p* |
| mirBase accession | None |
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| Sequence |
39- AUAUUUCUUGCCUCUACCAAUU -61
Get sequence
|
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