MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7398-o5

Family name MIR-7398 (all species)
Seed AAAUUUC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7398-o6  Sha-Mir-7398-o7  Sha-Mir-7398-o8  Sha-Mir-7398-o9  Sha-Mir-7398-o13  Sha-Mir-7398-o14  Sha-Mir-7398-P5e  Sha-Mir-7398-P5f  Sha-Mir-7398-P9d-v1  Sha-Mir-7398-P9d-v2  Sha-Mir-7398-P9e-v1  Sha-Mir-7398-P9e-v2  Sha-Mir-7398-P21  Sha-Mir-7398-P24c-v1  Sha-Mir-7398-P24c-v2  Sha-Mir-7398-P24d-v1  Sha-Mir-7398-P24d-v2 
Orthologues Mdo-Mir-7398-P5a  Mdo-Mir-7398-P5b  Mdo-Mir-7398-P5c  Mdo-Mir-7398-P5d  Neu-Mir-7398-P5 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867608.1: 2084664-2084724 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUAGAUUAAAGGUGCCUCCAGGUGCCCAACUGUGUAGAGGCAUGAAACAUGCUGUGUUCUGUGUACUGGUAAAUUUCUCGCCUCUCACAGUUGAGCAUCUAGGAAUUUUCUACAGGCCCCU
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Structure
        10          20        30        40        50        60
UUAGAUUAAAGGUGCCU-  -|     C        U      AU    CA    GUGUUC 
                  CC AGGUGC CAACUGUG AGAGGC  GAAA  UGCU      U
                  GG UCUACG GUUGACAC UCUCCG  CUUU  AUGG      G
UCCCCGGACAUCUUUUAA  A^     A        -      CU    AA    UCAUGU 
 .       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7398-o5_5p*
mirBase accessionNone
Sequence 
0- UGUGUAGAGGCAUGAAACAUGCU -23
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Mature sequence

Sha-Mir-7398-o5_3p
mirBase accessionNone
Sequence 
39- UAAAUUUCUCGCCUCUCACAGU -61
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