MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7398-P24d-v1

Family name MIR-7398 (all species)
Seed AUCUCAC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7398-o5  Sha-Mir-7398-o6  Sha-Mir-7398-o7  Sha-Mir-7398-o8  Sha-Mir-7398-o9  Sha-Mir-7398-o13  Sha-Mir-7398-o14  Sha-Mir-7398-P5e  Sha-Mir-7398-P5f  Sha-Mir-7398-P9d-v1  Sha-Mir-7398-P9d-v2  Sha-Mir-7398-P9e-v1  Sha-Mir-7398-P9e-v2  Sha-Mir-7398-P21  Sha-Mir-7398-P24c-v1  Sha-Mir-7398-P24c-v2  Sha-Mir-7398-P24d-v2 
Orthologues Neu-Mir-7398-P24 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867608.1: 2102079-2102138 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCGGGCACUUCGCUUUCCAGAUGCCUGGCAGUGCAGAGGGUGGUGAGCAUGCUGUGGUCUCUCGAGUAUCUCACCUUUCUCUGACUGUCCAGCGUCUAGGACUCUGCUUCGACCCAGCC
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Structure
        10           20         30        40        50          
CUCGGGCACUUCGCUUU--  -|     C   -    G       U      C    UGUGGU 
                   CC AGAUGC UGG CAGU CAGAGGG GGUGAG AUGC      \
                   GG UCUGCG ACC GUCA GUCUCUU CCACUC UAUG      C
CCGACCCAGCUUCGUCUCA  A^     -   U    -       U      -    AGCUCU 
.       110       100         90         80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7398-P24d-v1_5p*
mirBase accessionNone
Sequence 
0- AGUGCAGAGGGUGGUGAGCAUGC -23
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Mature sequence

Sha-Mir-7398-P24d-v1_3p
mirBase accessionNone
Sequence 
37- UAUCUCACCUUUCUCUGACUGUC -60
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