MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7398-o14

Family name MIR-7398 (all species)
Seed AAAUUCU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7398-o5  Sha-Mir-7398-o6  Sha-Mir-7398-o7  Sha-Mir-7398-o8  Sha-Mir-7398-o9  Sha-Mir-7398-o13  Sha-Mir-7398-P5e  Sha-Mir-7398-P5f  Sha-Mir-7398-P9d-v1  Sha-Mir-7398-P9d-v2  Sha-Mir-7398-P9e-v1  Sha-Mir-7398-P9e-v2  Sha-Mir-7398-P21  Sha-Mir-7398-P24c-v1  Sha-Mir-7398-P24c-v2  Sha-Mir-7398-P24d-v1  Sha-Mir-7398-P24d-v2 
Orthologues Mdo-Mir-7398-P14a  Mdo-Mir-7398-P14b  Neu-Mir-7398-o14 
Node of Origin (locus) S. harrisii
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867608.1: 2104962-2105021 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCUUGGGAUUUGGCCUCUAGGUGCCCAGCAGUGUUGAGGUUGGGAAUAUGCCAUGCUCUCUCUUGGGUAAAUUCUCAGCCUCUCACAGUUGAGCACCAAAGAUUCUUCUACUGUACCUU
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Structure
        10        20          30        40        50          
CUCUUGGGAUUUGGCCUCUA--|    C    A   UU            A    AUGCUC 
                      GGUGC CAGC GUG  GAGGUUGGGAAU UGCC      \
                      CCACG GUUG CAC  CUCCGACUCUUA AUGG      U
UUCCAUGUCAUCUUCUUAGAAA^    A    A   U-            A    GUUCUC 
.       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-7398-o14_5p*
mirBase accessionNone
Sequence 
0- AGUGUUGAGGUUGGGAAUAUGCC -23
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Mature sequence

Sha-Mir-7398-o14_3p
mirBase accessionNone
Sequence 
38- UAAAUUCUCAGCCUCUCACAGU -60
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