MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-7398-P21

Family name MIR-7398 (all species)
Seed GUAGAGA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-7398-o5  Sha-Mir-7398-o6  Sha-Mir-7398-o7  Sha-Mir-7398-o8  Sha-Mir-7398-o9  Sha-Mir-7398-o13  Sha-Mir-7398-o14  Sha-Mir-7398-P5e  Sha-Mir-7398-P5f  Sha-Mir-7398-P9d-v1  Sha-Mir-7398-P9d-v2  Sha-Mir-7398-P9e-v1  Sha-Mir-7398-P9e-v2  Sha-Mir-7398-P24c-v1  Sha-Mir-7398-P24c-v2  Sha-Mir-7398-P24d-v1  Sha-Mir-7398-P24d-v2 
Orthologues Mdo-Mir-7398-P21  Neu-Mir-7398-P21a  Neu-Mir-7398-P21b 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(DEVIL_add)		 GL867608.1: 2093388-2093443 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGGGCGCUCUGUCCUCCAGGUGUCUGGCAGUGUAGAGAGGGGUGAAGGUUGCUGUGAUAUAUUAGGUAAUUCACCCUUCUCUCACUAACCGGCACCUCGGGCUCUUCUUCGACCCC
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Structure
        10          20         30        40        50         
CGGGCGCUCUGUCCUCC--|    U    C-    U            AG     UGUGAU 
                   AGGUG CUGG  AGUG AGAGAGGGGUGA  GUUGC      \
                   UCCAC GGCC  UCAC UCUCUUCCCACU  UAAUG      A
CCCCAGCUUCUUCUCGGGC^    -    AA    -            --     GAUUAU 
    110       100         90         80          70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-7398-P21_5p
mirBase accessionNone
Sequence 
0- UGUAGAGAGGGGUGAAGGUUGC -22
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Co-mature sequence

Sha-Mir-7398-P21_3p
mirBase accessionNone
Sequence 
36- UAAUUCACCCUUCUCUCACU -56
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