| MirGeneDB ID | Neu-Mir-7398-P21a |
|---|---|
| Family name | MIR-7398 (all species) |
| Seed | AAUUCAC |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-7398-o7a Neu-Mir-7398-o7b Neu-Mir-7398-o7c Neu-Mir-7398-o13 Neu-Mir-7398-o14 Neu-Mir-7398-P5 Neu-Mir-7398-P9f Neu-Mir-7398-P9g Neu-Mir-7398-P21b Neu-Mir-7398-P23 Neu-Mir-7398-P24 Neu-Mir-7398-P26 |
| Orthologues | Mdo-Mir-7398-P21 Sha-Mir-7398-P21 |
| Node of Origin (locus) | N. eugenii |
| Node of Origin (family) | Marsupialia |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 76345814-76345868 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAGGCACUUUCUCCUCCAGGUGUCUGGCAGUGUAGAGAGUGGUGAGCAUGCUGUGCUGUAUCAGGUAAUUCACCCUUCUCUCACUAACUGGCACCUUGGGCUCUUCUUCAACCCCGet precursor sequence |
| Structure | 10 20 30 40 50 CAGGCACUUUCUCCUCC--| UGGC U U CA GUGCU AGGUGUC AGUG AGAGAG GGUGAG UGCU \ UCCACGG UCAC UCUCUU CCACUU AUGG G CCCCAACUUCUUCUCGGGU^ UCAA - C A- ACUAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Star sequence | Neu-Mir-7398-P21a_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UGUAGAGAGUGGUGAGCAUGCU -22
Get sequence
|
| Mature sequence | Neu-Mir-7398-P21a_3p |
| mirBase accession | None |
| Sequence |
35- UAAUUCACCCUUCUCUCACU -55
Get sequence
|
