MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-7398-P23

Family name MIR-7398 (all species)
Seed AACCUUU
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-7398-o7a  Neu-Mir-7398-o7b  Neu-Mir-7398-o7c  Neu-Mir-7398-o13  Neu-Mir-7398-o14  Neu-Mir-7398-P5  Neu-Mir-7398-P9f  Neu-Mir-7398-P9g  Neu-Mir-7398-P21a  Neu-Mir-7398-P21b  Neu-Mir-7398-P24  Neu-Mir-7398-P26 
Orthologues Mdo-Mir-7398-P23a  Mdo-Mir-7398-P23b 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051820.1: 76354266-76354324 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCCUGUGAUUUCUCCUCCAGGUGCCCCACUGUGAAGAGGGGAGUGAGGAUACUGUGCACUAUCAGGUAACCUUUCCUACUCUCACUGUGGGGCAUCUUGGACUCCUCUCCUGGACUCC
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Structure
        10          20        30         40        50          
UGCCUGUGAUUUCUCCU-  -|          U    A   -    GU    A  CUGUGCA 
                  CC AGGUGCCCCAC GUGA GAG GGGA  GAGG UA       \
                  GG UCUACGGGGUG CACU CUC UCCU  UUCC AU       C
CCUCAGGUCCUCUCCUCA  U^          U    -   A    --    A  GGACUAU 
       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Star sequence

Neu-Mir-7398-P23_5p*

mirBase accessionNone
Sequence
0- UGUGAAGAGGGGAGUGAGGAUA -22
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Mature sequence

Neu-Mir-7398-P23_3p

mirBase accessionNone
Sequence
37- UAACCUUUCCUACUCUCACUGU -59
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