MirGeneDB ID | Neu-Mir-7398-P23 |
Family name |
MIR-7398 (all species) |
Seed |
AACCUUU |
Species |
Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID |
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Paralogues |
Neu-Mir-7398-o7a
Neu-Mir-7398-o7b
Neu-Mir-7398-o7c
Neu-Mir-7398-o13
Neu-Mir-7398-o14
Neu-Mir-7398-P5
Neu-Mir-7398-P9f
Neu-Mir-7398-P9g
Neu-Mir-7398-P21a
Neu-Mir-7398-P21b
Neu-Mir-7398-P24
Neu-Mir-7398-P26
|
Orthologues |
Mdo-Mir-7398-P23a
Mdo-Mir-7398-P23b
|
Node of Origin (locus) |
Marsupialia
|
Node of Origin (family) |
Marsupialia
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Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 76354266-76354324 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UGCCUGUGAUUUCUCCUCCAGGUGCCCCACUGUGAAGAGGGGAGUGAGGAUACUGUGCACUAUCAGGUAACCUUUCCUACUCUCACUGUGGGGCAUCUUGGACUCCUCUCCUGGACUCC
Get precursor sequence
|
Structure | 10 20 30 40 50
UGCCUGUGAUUUCUCCU- -| U A - GU A CUGUGCA
CC AGGUGCCCCAC GUGA GAG GGGA GAGG UA \
GG UCUACGGGGUG CACU CUC UCCU UUCC AU C
CCUCAGGUCCUCUCCUCA U^ U - A -- A GGACUAU
110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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Star sequence |
Neu-Mir-7398-P23_5p* |
mirBase accession | None |
Sequence |
0- UGUGAAGAGGGGAGUGAGGAUA -22
Get sequence
|
Mature sequence |
Neu-Mir-7398-P23_3p |
mirBase accession | None |
Sequence |
37- UAACCUUUCCUACUCUCACUGU -59
Get sequence
|