MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-7398-P9g

Family name MIR-7398 (all species)
Seed GUGUAGA
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-7398-o7a  Neu-Mir-7398-o7b  Neu-Mir-7398-o7c  Neu-Mir-7398-o13  Neu-Mir-7398-o14  Neu-Mir-7398-P5  Neu-Mir-7398-P9f  Neu-Mir-7398-P21a  Neu-Mir-7398-P21b  Neu-Mir-7398-P23  Neu-Mir-7398-P24  Neu-Mir-7398-P26 
Orthologues Sha-Mir-7398-o9 
Node of Origin (locus) N. eugenii
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051820.1: 76333901-76333959 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCUGUUCGUUGACCUCCAGGUGCCCGAUUGUGUAGAGGUAAGAAAUAUGCUGUGUUCUUGAUUGGUAUAUUUCUUGCCUCUAUCAACUGAGCAUCUUGGACUUUGCUGCUGUCCCCU
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Structure
        10          20        30        40        50         
CUCCUGUUCGUUGACCU-  -|     C  A   U                    GUGUU 
                  CC AGGUGC CG UUG GUAGAGGUAAGAAAUAUGCU     C
                  GG UCUACG GU AAC UAUCUCCGUUCUUUAUAUGG     U
UCCCCUGUCGUCGUUUCA  U^     A  C   -                    UUAGU 
       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-7398-P9g_5p

mirBase accessionNone
Sequence
0- UGUGUAGAGGUAAGAAAUAUGCU -23
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Star sequence

Neu-Mir-7398-P9g_3p*

mirBase accessionNone
Sequence
37- UAUAUUUCUUGCCUCUAUCAAC -59
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