MirGeneDB ID | Neu-Mir-7398-P9g |
Family name |
MIR-7398 (all species) |
Seed |
GUGUAGA |
Species |
Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID |
|
Paralogues |
Neu-Mir-7398-o7a
Neu-Mir-7398-o7b
Neu-Mir-7398-o7c
Neu-Mir-7398-o13
Neu-Mir-7398-o14
Neu-Mir-7398-P5
Neu-Mir-7398-P9f
Neu-Mir-7398-P21a
Neu-Mir-7398-P21b
Neu-Mir-7398-P23
Neu-Mir-7398-P24
Neu-Mir-7398-P26
|
Orthologues |
Sha-Mir-7398-o9
|
Node of Origin (locus) |
N. eugenii
|
Node of Origin (family) |
Marsupialia
|
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 76333901-76333959 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUCCUGUUCGUUGACCUCCAGGUGCCCGAUUGUGUAGAGGUAAGAAAUAUGCUGUGUUCUUGAUUGGUAUAUUUCUUGCCUCUAUCAACUGAGCAUCUUGGACUUUGCUGCUGUCCCCU
Get precursor sequence
|
Structure | 10 20 30 40 50
CUCCUGUUCGUUGACCU- -| C A U GUGUU
CC AGGUGC CG UUG GUAGAGGUAAGAAAUAUGCU C
GG UCUACG GU AAC UAUCUCCGUUCUUUAUAUGG U
UCCCCUGUCGUCGUUUCA U^ A C - UUAGU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UGUG in loop |
Tissue expression
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Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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Mature sequence |
Neu-Mir-7398-P9g_5p |
mirBase accession | None |
Sequence |
0- UGUGUAGAGGUAAGAAAUAUGCU -23
Get sequence
|
Star sequence |
Neu-Mir-7398-P9g_3p* |
mirBase accession | None |
Sequence |
37- UAUAUUUCUUGCCUCUAUCAAC -59
Get sequence
|