MirGeneDB ID | Neu-Mir-7398-P9g |
---|---|
Family name | MIR-7398 (all species) |
Seed | GUGUAGA |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | Neu-Mir-7398-o7a Neu-Mir-7398-o7b Neu-Mir-7398-o7c Neu-Mir-7398-o13 Neu-Mir-7398-o14 Neu-Mir-7398-P5 Neu-Mir-7398-P9f Neu-Mir-7398-P21a Neu-Mir-7398-P21b Neu-Mir-7398-P23 Neu-Mir-7398-P24 Neu-Mir-7398-P26 |
Orthologues | Sha-Mir-7398-o9 |
Node of Origin (locus) | N. eugenii |
Node of Origin (family) | Marsupialia |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 76333901-76333959 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CUCCUGUUCGUUGACCUCCAGGUGCCCGAUUGUGUAGAGGUAAGAAAUAUGCUGUGUUCUUGAUUGGUAUAUUUCUUGCCUCUAUCAACUGAGCAUCUUGGACUUUGCUGCUGUCCCCUGet precursor sequence |
Structure | 10 20 30 40 50 CUCCUGUUCGUUGACCU- -| C A U GUGUU CC AGGUGC CG UUG GUAGAGGUAAGAAAUAUGCU C GG UCUACG GU AAC UAUCUCCGUUCUUUAUAUGG U UCCCCUGUCGUCGUUUCA U^ A C - UUAGU 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | No |
Motifs | UGUG in loop |
Mature sequence | Neu-Mir-7398-P9g_5p |
mirBase accession | None |
Sequence |
0- UGUGUAGAGGUAAGAAAUAUGCU -23
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|
Star sequence | Neu-Mir-7398-P9g_3p* |
mirBase accession | None |
Sequence |
37- UAUAUUUCUUGCCUCUAUCAAC -59
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