| MirGeneDB ID | Neu-Mir-7398-o7a |
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| Family name |
MIR-7398 (all species) |
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| Seed |
GUGUAGA |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
Neu-Mir-7398-o7b
Neu-Mir-7398-o7c
Neu-Mir-7398-o13
Neu-Mir-7398-o14
Neu-Mir-7398-P5
Neu-Mir-7398-P9f
Neu-Mir-7398-P9g
Neu-Mir-7398-P21a
Neu-Mir-7398-P21b
Neu-Mir-7398-P23
Neu-Mir-7398-P24
Neu-Mir-7398-P26
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| Orthologues |
Sha-Mir-7398-o7
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| Node of Origin (locus) |
N. eugenii
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| Node of Origin (family) |
Marsupialia
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 76338802-76338860 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUCCUAGGCUUUGACCUCCAGGUGCCCGACUGUGUAGAGGCGAGAAAAUUACUGUGUUGUGACUUGGUAAAUUUCUUGCCUUUCACAAUUGAGUAUCUGGGACUCUGCUACUGUCCCCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CUCCUAGGCUUUGACCU--| C C U A GUGUU
CCAGGUGC CGA UGUG AGAGGCGAGAAA UUACU G
GGUCUAUG GUU ACAC UUUCCGUUCUUU AAUGG U
UCCCCUGUCAUCGUCUCAG^ A A - A UUCAG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Mature sequence |
Neu-Mir-7398-o7a_5p |
| mirBase accession | None |
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| Sequence |
0- UGUGUAGAGGCGAGAAAAUUACU -23
Get sequence
|
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| Star sequence |
Neu-Mir-7398-o7a_3p* |
| mirBase accession | None |
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| Sequence |
37- UAAAUUUCUUGCCUUUCACAAU -59
Get sequence
|
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