MirGeneDB ID | Neu-Mir-7398-o7a |
---|---|
Family name | MIR-7398 (all species) |
Seed | GUGUAGA |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | Neu-Mir-7398-o7b Neu-Mir-7398-o7c Neu-Mir-7398-o13 Neu-Mir-7398-o14 Neu-Mir-7398-P5 Neu-Mir-7398-P9f Neu-Mir-7398-P9g Neu-Mir-7398-P21a Neu-Mir-7398-P21b Neu-Mir-7398-P23 Neu-Mir-7398-P24 Neu-Mir-7398-P26 |
Orthologues | Sha-Mir-7398-o7 |
Node of Origin (locus) | N. eugenii |
Node of Origin (family) | Marsupialia |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 76338802-76338860 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CUCCUAGGCUUUGACCUCCAGGUGCCCGACUGUGUAGAGGCGAGAAAAUUACUGUGUUGUGACUUGGUAAAUUUCUUGCCUUUCACAAUUGAGUAUCUGGGACUCUGCUACUGUCCCCUGet precursor sequence |
Structure | 10 20 30 40 50 CUCCUAGGCUUUGACCU--| C C U A GUGUU CCAGGUGC CGA UGUG AGAGGCGAGAAA UUACU G GGUCUAUG GUU ACAC UUUCCGUUCUUU AAUGG U UCCCCUGUCAUCGUCUCAG^ A A - A UUCAG 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | No |
Motifs | CNNC at 3p(+17), UGUG in loop |
Mature sequence | Neu-Mir-7398-o7a_5p |
mirBase accession | None |
Sequence |
0- UGUGUAGAGGCGAGAAAAUUACU -23
Get sequence
|
Star sequence | Neu-Mir-7398-o7a_3p* |
mirBase accession | None |
Sequence |
37- UAAAUUUCUUGCCUUUCACAAU -59
Get sequence
|