MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-7398-o7b

Family name MIR-7398 (all species)
Seed GUGUAGA
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-7398-o7a  Neu-Mir-7398-o7c  Neu-Mir-7398-o13  Neu-Mir-7398-o14  Neu-Mir-7398-P5  Neu-Mir-7398-P9f  Neu-Mir-7398-P9g  Neu-Mir-7398-P21a  Neu-Mir-7398-P21b  Neu-Mir-7398-P23  Neu-Mir-7398-P24  Neu-Mir-7398-P26 
Orthologues Sha-Mir-7398-o7 
Node of Origin (locus) N. eugenii
Node of Origin (family) Marsupialia
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051820.1: 76339936-76339994 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCUGUUCUUUGACCUCCAGGUGCCCGACUGUGUAGAGGUGAGAAAAUUACUGUGUUGUAUCUUGGUAAAUUUCUUGCCUUUCACAAUUGAGCAUCUUGGACUCUGCUACUGUCUCCC
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Structure
        10          20        30        40        50         
CUCCUGUUCUUUGACCU-  -|     C   C    U     UG     A     GUGUU 
                  CC AGGUGC CGA UGUG AGAGG  AGAAA UUACU     G
                  GG UCUACG GUU ACAC UUUCC  UCUUU AAUGG     U
CCCUCUGUCAUCGUCUCA  U^     A   A    -     GU     A     UUCUA 
       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Mature sequence

Neu-Mir-7398-o7b_5p

mirBase accessionNone
Sequence
0- UGUGUAGAGGUGAGAAAAUUACU -23
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Star sequence

Neu-Mir-7398-o7b_3p*

mirBase accessionNone
Sequence
37- UAAAUUUCUUGCCUUUCACAAU -59
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