| MirGeneDB ID | Neu-Mir-7398-o7c |
|---|---|
| Family name | MIR-7398 (all species) |
| Seed | GUGUAGA |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | Neu-Mir-7398-o7a Neu-Mir-7398-o7b Neu-Mir-7398-o13 Neu-Mir-7398-o14 Neu-Mir-7398-P5 Neu-Mir-7398-P9f Neu-Mir-7398-P9g Neu-Mir-7398-P21a Neu-Mir-7398-P21b Neu-Mir-7398-P23 Neu-Mir-7398-P24 Neu-Mir-7398-P26 |
| Orthologues | Sha-Mir-7398-o7 |
| Node of Origin (locus) | N. eugenii |
| Node of Origin (family) | Marsupialia |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 76340242-76340300 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUCCUGUUCUUUGACCUCCAGGUGCCCGACUGUGUAGAGGCGAGAAAAUUACUGUGUUGUAUCUUGGUAAAUUUCUUGCCUUUCACAAUUGAGUAUCUUGGACUCUGCUACUGUCCCCUGet precursor sequence |
| Structure | 10 20 30 40 50 CUCCUGUUCUUUGACCU- -| C C U A GUGUU CC AGGUGC CGA UGUG AGAGGCGAGAAA UUACU G GG UCUAUG GUU ACAC UUUCCGUUCUUU AAUGG U UCCCCUGUCAUCGUCUCA U^ A A - A UUCUA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Mature sequence | Neu-Mir-7398-o7c_5p |
| mirBase accession | None |
| Sequence |
0- UGUGUAGAGGCGAGAAAAUUACU -23
Get sequence
|
| Star sequence | Neu-Mir-7398-o7c_3p* |
| mirBase accession | None |
| Sequence |
37- UAAAUUUCUUGCCUUUCACAAU -59
Get sequence
|
