MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-722-P2-v1

Family name MIR-722 (all species)
Seed UUUGCAG
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues Tni-Mir-722-P1-v1  Tni-Mir-722-P1-v2  Tni-Mir-722-P2-v2 
Orthologues Dre-Mir-722-P2-v1  Dre-Mir-722-P2-v2  Gmo-Mir-722-P2-v1  Gmo-Mir-722-P2-v2  Lch-Mir-722  Mal-Mir-722-P2-v1  Mal-Mir-722-P2-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Osteichthyes
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 Un_random: 14853546-14853610 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUUUGAACGAGCACCGGAGCACAACGGAGUUUGAAACGUUUUGGCCAAAAAUGUUUCCACGGUCAAGGUGUUUUUUGCAGAAACGUUUCAGAUUUCAUCGUGUUUUCCUGCUUCGCGGCAGAGA
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Structure
        10          20        30        40        50        60  
UGUUUGAACGAGCACCG--|     AAC                 G  C     UGUUUCCAC 
                   GAGCAC   GGAGUUUGAAACGUUUU GC AAAAA         \
                   UUUGUG   CUUUAGACUUUGCAAAG CG UUUUU         G
AGAGACGGCGCUUCGUCCU^     CUA                 A  U     GUGGAACUG 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Sp Sp Sp To
Star sequence

Tni-Mir-722-P2-v1_5p*
mirBase accessionNone
Sequence 
0- UUUGAAACGUUUUGGCCAAAAA -22
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Mature sequence

Tni-Mir-722-P2-v1_3p
mirBase accessionNone
Sequence 
43- UUUUGCAGAAACGUUUCAGAUU -65
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