MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-722-P2-v2

Family name MIR-722 (all species)
Seed UUGCAGA
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues Tni-Mir-722-P1-v1  Tni-Mir-722-P1-v2  Tni-Mir-722-P2-v1 
Orthologues Dre-Mir-722-P2-v1  Dre-Mir-722-P2-v2  Gmo-Mir-722-P2-v1  Gmo-Mir-722-P2-v2  Lch-Mir-722  Mal-Mir-722-P2-v1  Mal-Mir-722-P2-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Osteichthyes
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 Un_random: 14853546-14853610 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUUUGAACGAGCACCGGAGCACAACGGAGUUUGAAACGUUUUGGCCAAAAAUGUUUCCACGGUCAAGGUGUUUUUUGCAGAAACGUUUCAGAUUUCAUCGUGUUUUCCUGCUUCGCGGCAGAGA
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Structure
        10          20        30        40        50        60  
UGUUUGAACGAGCACCG--|     AAC                 G  C    AUGUUUCCAC 
                   GAGCAC   GGAGUUUGAAACGUUUU GC AAAA          \
                   UUUGUG   CUUUAGACUUUGCAAAG CG UUUU          G
AGAGACGGCGCUUCGUCCU^     CUA                 A  U    UGUGGAACUG 
   120       110       100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sp Sp Sp To
Star sequence

Tni-Mir-722-P2-v2_5p*
mirBase accessionNone
Sequence 
0- UUUGAAACGUUUUGGCCAAAA -21
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Mature sequence

Tni-Mir-722-P2-v2_3p
mirBase accessionNone
Sequence 
44- UUUGCAGAAACGUUUCAGAUU -65
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