| MirGeneDB ID | Lch-Mir-722 |
|---|---|
| Family name | MIR-722 (all species) |
| Seed | UUUGCAG |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Dre-Mir-722-P1-v1 Dre-Mir-722-P1-v2 Dre-Mir-722-P2-v1 Dre-Mir-722-P2-v2 Gmo-Mir-722-P1-v1 Gmo-Mir-722-P1-v2 Gmo-Mir-722-P2-v1 Gmo-Mir-722-P2-v2 Loc-Mir-722-v1 Loc-Mir-722-v2 Mal-Mir-722-P1-v1 Mal-Mir-722-P1-v2 Mal-Mir-722-P2-v1 Mal-Mir-722-P2-v2 Tni-Mir-722-P1-v1 Tni-Mir-722-P1-v2 Tni-Mir-722-P2-v1 Tni-Mir-722-P2-v2 |
| Node of Origin (locus) | Osteichthyes |
| Node of Origin (family) | Osteichthyes |
| Genome context (LatCha1_add) |
JH126596.1: 1163895-1163959 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | UGAAGCUGCUGAGAUCAGAACAGAAUGGAAUUUGAAACGUUUUAGCCAAAAAUGUUGCCAUGGUAACGGGGUUUUUUGCAGAAACGUUUCAGAUUUCGUUCCGUUCUCCAUCAUCGUGUCAUGUCGet precursor sequence |
| Structure | 10 20 30 40 50 60 UGAAGCUGCUGAGAUCA--| A A C UGUUGCCAU GAAC GAAUGGAAUUUGAAACGUUUU GC AAAAA \ CUUG CUUGCUUUAGACUUUGCAAAG CG UUUUU G CUGUACUGUGCUACUACCU^ C A U GGGGCAAUG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Star sequence | Lch-Mir-722_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UUUGAAACGUUUUAGCCAAAAA -22
Get sequence
|
| Mature sequence | Lch-Mir-722_3p (predicted) |
| mirBase accession | None |
| Sequence |
43- UUUUGCAGAAACGUUUCAGAUU -65
Get sequence
|
