MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-722-P1-v2

Family name MIR-722 (all species)
Seed UUGCAGA
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-722-2
Paralogues Gmo-Mir-722-P1-v1  Gmo-Mir-722-P2-v1  Gmo-Mir-722-P2-v2 
Orthologues Dre-Mir-722-P1-v1  Dre-Mir-722-P1-v2  Lch-Mir-722  Mal-Mir-722-P1-v1  Mal-Mir-722-P1-v2  Tni-Mir-722-P1-v1  Tni-Mir-722-P1-v2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Osteichthyes
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 GeneScaffold_2428: 437726-437790 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-722-P1-v2)		 Mir-722-P1-v1 GeneScaffold_2428: 437726-437790 [+] UCSC Ensembl
Mir-722-P1-v2 GeneScaffold_2428: 437726-437790 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACGACGACGAGAGACUGGAACGGAAUGGAAUUUGAAACGUUUUAGCCAAAAAUGUUUCCAUAGUCAAGGUGUUUUUUGCAGAAACGUUUCAGAUUUCGUUCCGUUCUCCAGCUUCAGCCAGAAGC
Get precursor sequence
Structure
        10          20        30        40        50        60  
ACGACGACGAGAGACUG--|                         A  C    AUGUUUCCAU 
                   GAACGGAAUGGAAUUUGAAACGUUUU GC AAAA          \
                   CUUGCCUUGCUUUAGACUUUGCAAAG CG UUUU          A
CGAAGACCGACUUCGACCU^                         A  U    UGUGGAACUG 
   120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Gi He In Li Sk Sp Wh
Star sequence

Gmo-Mir-722-P1-v2_5p*
mirBase accessionMIMAT0046050
Sequence 
0- UUUGAAACGUUUUAGCCAAAA -21
Get sequence
Mature sequence

Gmo-Mir-722-P1-v2_3p
mirBase accessionMIMAT0044001
Sequence 
44- UUUGCAGAAACGUUUCAGAUU -65
Get sequence