MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-727-P1-v1

Family name MIR-727 (all species)
Seed UGAGGCG
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues Tni-Mir-727-P1-v2  Tni-Mir-727-P2-v1  Tni-Mir-727-P2-v2 
Orthologues Dre-Mir-727-P1-v1  Dre-Mir-727-P1-v2  Gmo-Mir-727-P1  Spt-Mir-727 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Osteichthyes
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 6: 6650136-6650202 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGUGAAGGAGGUCCAGCUGAGUGGCGCUUUCAGUCUUCAGUUCCUCCCAGCCCAUAAUGUUGUCAACACUGUGUUGAGGCGAGUUGAAGACUUAAAGCGCUGCUCAGAUUCGUGCCGCAGACCCGA
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Structure
        10          20        30        40         50        60   
UGGUGAAGGAGGUCCAG--|    UG       C        GU  CU  -    CCAUAAUGUU 
                   CUGAG  GCGCUUU AGUCUUCA  UC  CC CAGC          \
                   GACUC  CGCGAAA UCAGAAGU  AG  GG GUUG          G
AGCCCAGACGCCGUGCUUA^    GU       U        UG  C-  A    UGUCACAACU 
     120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Sp Sp Sp To
Star sequence

Tni-Mir-727-P1-v1_5p* (predicted)
mirBase accessionNone
Sequence 
0- UCAGUCUUCAGUUCCUCCCAGCC -23
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Mature sequence

Tni-Mir-727-P1-v1_3p
mirBase accessionNone
Sequence 
44- UUGAGGCGAGUUGAAGACUUAAA -67
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