MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-727-P2-v1

Family name MIR-727 (all species)
Seed UGAGGCG
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues Tni-Mir-727-P1-v1  Tni-Mir-727-P1-v2  Tni-Mir-727-P2-v2 
Orthologues Gmo-Mir-727-P2  Mal-Mir-727-P2-v1  Mal-Mir-727-P2-v2  Spt-Mir-727 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Osteichthyes
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 15: 2764145-2764210 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCAACACCCACUGUCCUGUAUGUCUUUUUCAGUCUUCAAUUCCUCCCAGCCCGUUACUAUGGAAACUGUGAGUUGAGGCGAGUUGAAGACUAAAAAUGCUGUACAGAUUCACGUAGCAGCUGGU
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Structure
        10         20         30        40         50        60   
CAGCAACACCCACUGUC-      -| C     C            CU  -    CCGUUACUAU 
                  CUGUAU GU UUUUU AGUCUUCAAUUC  CC CAGC          \
                  GACAUG CG AAAAA UCAGAAGUUGAG  GG GUUG          G
UGGUCGACGAUGCACUUA      U^ U     -            C-  A    AGUGUCAAAG 
    120       110       100         90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Sp Sp Sp To
Star sequence

Tni-Mir-727-P2-v1_5p* (predicted)
mirBase accessionNone
Sequence 
0- UCAGUCUUCAAUUCCUCCCAGCC -23
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Mature sequence

Tni-Mir-727-P2-v1_3p
mirBase accessionNone
Sequence 
44- UUGAGGCGAGUUGAAGACUAAA -66
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