MirGeneDB 3.0

MirGeneDB ID

Xla-Mir-455-P3

Family name MIR-455 (all species)
Seed AUGUGCC
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-455-P4 
Orthologues Gja-Mir-455  Lch-Mir-455  Mun-Mir-455  Pbv-Mir-455  Pma-Mir-455  Spt-Mir-455  Xtr-Mir-455 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)
NC_030739.1: 35041228-35041285 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUGCAUAGAAUGCCUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGUUUAUUUCAUCACGGAGA
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Structure
        10          20        30        40        50        
UCUGCAUAGAAUGCCUC-  -|  U UG  G          U      A   C UGGAA 
                  CC UGG G  AG GUAUGUGCCC UGGACU CAU G     G
                  GG ACU C  UC CAUAUACGGG ACCUGA GUA C     C
AGAGGCACUACUUUAUUU  A^  C GU  A          U      C   C ACGAC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Em
Mature sequence

Xla-Mir-455-P3_5p

mirBase accessionNone
Sequence
0- UAUGUGCCCUUGGACUACAUCG -22
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Star sequence

Xla-Mir-455-P3_3p*

mirBase accessionNone
Sequence
36- AUGCAGUCCAUGGGCAUAUACA -58
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