| MirGeneDB ID | Xla-Mir-455-P3 |
|---|
| Family name |
MIR-455 (all species) |
|---|
| Seed |
AUGUGCC |
|---|
| Species |
African clawed frog (Xenopus laevis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Xla-Mir-455-P4
|
|---|
| Orthologues |
Gja-Mir-455
Lch-Mir-455
Mun-Mir-455
Pbv-Mir-455
Pma-Mir-455
Spt-Mir-455
Xtr-Mir-455
|
|---|
| Node of Origin (locus) |
X. laevis
|
|---|
| Node of Origin (family) |
Vertebrata
|
|---|
Genome context
(GCF_001663975.1_XLA_v2) |
NC_030739.1: 35041228-35041285 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCUGCAUAGAAUGCCUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGUUUAUUUCAUCACGGAGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCUGCAUAGAAUGCCUC- -| U UG G U A C UGGAA
CC UGG G AG GUAUGUGCCC UGGACU CAU G G
GG ACU C UC CAUAUACGGG ACCUGA GUA C C
AGAGGCACUACUUUAUUU A^ C GU A U C C ACGAC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Xla-Mir-455-P3_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAUGUGCCCUUGGACUACAUCG -22
Get sequence
|
|---|
| Star sequence |
Xla-Mir-455-P3_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- AUGCAGUCCAUGGGCAUAUACA -58
Get sequence
|
|---|
