| MirGeneDB ID | Lch-Mir-455 |
|---|---|
| Family name | MIR-455 (all species) |
| Seed | AUGUGCC |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-455 Ami-Mir-455 Bta-Mir-455 Cfa-Mir-455 Cli-Mir-455 Cmi-Mir-455 Cpi-Mir-455 Cpo-Mir-455 Dno-Mir-455 Dre-Mir-455-P1 Dre-Mir-455-P2 Ebu-Mir-455-v1 Ebu-Mir-455-v2 Ete-Mir-455 Gga-Mir-455 Gja-Mir-455 Gmo-Mir-455-P1 Gmo-Mir-455-P2 Hsa-Mir-455 Loc-Mir-455 Mal-Mir-455-P1 Mal-Mir-455-P2 Mdo-Mir-455 Mml-Mir-455 Mmu-Mir-455 Mun-Mir-455 Oan-Mir-455 Ocu-Mir-455 Pbv-Mir-455 Pma-Mir-455 Rno-Mir-455 Sha-Mir-455 Spt-Mir-455 Sto-Mir-455 Tgu-Mir-455 Tni-Mir-455-P1 Tni-Mir-455-P2 Xla-Mir-455-P3 Xla-Mir-455-P4 Xtr-Mir-455 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH126718.1: 1276277-1276334 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | CGGAAGAAGUAUUGAUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGCUUUGUUCAUCACAGAGAGet precursor sequence |
| Structure | 10 20 30 40 50 CGGAAGAAGUAUUGAUC- -| U UG G U A C UGGAA CC UGG G AG GUAUGUGCCC UGGACU CAU G G GG ACU C UC CAUAUACGGG ACCUGA GUA C C AGAGACACUACUUGUUUC A^ C GU A U C C ACGAC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Lch-Mir-455_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UAUGUGCCCUUGGACUACAUCG -22
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|
| Star sequence | Lch-Mir-455_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- AUGCAGUCCAUGGGCAUAUACA -58
Get sequence
|
