MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-455-P2-v1

Family name MIR-455 (all species)
Seed AUGUGCC
Species Cod (Gadus morhua)
MiRBase ID
Paralogues Gmo-Mir-455-P1-v1  Gmo-Mir-455-P1-v2  Gmo-Mir-455-P1-v3  Gmo-Mir-455-P2-v2  Gmo-Mir-455-P2-v3 
Orthologues Dre-Mir-455-P2-v1  Dre-Mir-455-P2-v2  Dre-Mir-455-P2-v3  Gja-Mir-455  Lch-Mir-455  Mal-Mir-455-P2-v1  Mal-Mir-455-P2-v2  Mal-Mir-455-P2-v3  Mun-Mir-455  Pbv-Mir-455  Pma-Mir-455  Spt-Mir-455  Tni-Mir-455-P2-v1  Tni-Mir-455-P2-v2  Tni-Mir-455-P2-v3  Xtr-Mir-455 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 GeneScaffold_3257: 458860-458917 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCUAUCAUCAGAGAUCCCUGGCGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCUUCAAGGCUUGGUUCUUCAAUCGCC
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Structure
        10          20        30        40        50        
CCCUAUCAUCAGAGAUC-  -|  C UG  G          U      A   C UGGAA 
                  CC UGG G  AG GUAUGUGCCC UGGACU CAU G     G
                  GG ACU C  UC CAUAUACGGG ACCUGA GUA C     C
CCGCUAACUUCUUGGUUC  A^  U GU  A          U      C   C ACGAC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Gi He In Li Sk Sp Wh
Mature sequence

Gmo-Mir-455-P2-v1_5p
mirBase accessionNone
Sequence 
0- UAUGUGCCCUUGGACUACAUCG -22
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Star sequence

Gmo-Mir-455-P2-v1_3p*
mirBase accessionNone
Sequence 
36- AUGCAGUCCAUGGGCAUAUACA -58
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