MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-455-P2-v3

Family name MIR-455 (all species)
Seed GCAGUCC
Species Cod (Gadus morhua)
MiRBase ID
Paralogues Gmo-Mir-455-P1-v1  Gmo-Mir-455-P1-v2  Gmo-Mir-455-P1-v3  Gmo-Mir-455-P2-v1  Gmo-Mir-455-P2-v2 
Orthologues Dre-Mir-455-P2-v1  Dre-Mir-455-P2-v2  Dre-Mir-455-P2-v3  Gja-Mir-455  Lch-Mir-455  Mal-Mir-455-P2-v1  Mal-Mir-455-P2-v2  Mal-Mir-455-P2-v3  Mun-Mir-455  Pbv-Mir-455  Pma-Mir-455  Spt-Mir-455  Tni-Mir-455-P2-v1  Tni-Mir-455-P2-v2  Tni-Mir-455-P2-v3  Xtr-Mir-455 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 GeneScaffold_3257: 458859-458918 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCCUAUCAUCAGAGAUCCCUGGCGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCUUCAAGGCUUGGUUCUUCAAUCGCCU
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Structure
        10          20        30        40        50         
CCCCUAUCAUCAGAGAU--| C   C UG  G          U      A   CGUGGAA 
                   CC UGG G  AG GUAUGUGCCC UGGACU CAU       G
                   GG ACU C  UC CAUAUACGGG ACCUGA GUA       C
UCCGCUAACUUCUUGGUUC^ A   U GU  A          U      C   CCACGAC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsUGUG in loop
Tissue expression
-   +
Br Gi He In Li Sk Sp Wh
Star sequence

Gmo-Mir-455-P2-v3_5p*
mirBase accessionNone
Sequence 
0- GUAUGUGCCCUUGGACUACAUC -22
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Mature sequence

Gmo-Mir-455-P2-v3_3p
mirBase accessionNone
Sequence 
38- UGCAGUCCAUGGGCAUAUACAC -60
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