MirGeneDB ID | Laf-Mir-455-v1 |
Family name |
MIR-455 (all species) |
Seed |
AUGUGCC |
Species |
African bush elephant (Loxodonta africana) |
MiRBase ID |
|
Paralogues |
Laf-Mir-455-v2
Laf-Mir-455-v3
|
Orthologues |
Aca-Mir-455-v1
Ami-Mir-455-v1
Bta-Mir-455-v1
Cfa-Mir-455-v1
Cja-Mir-455-v1
Cli-Mir-455-v1
Cmi-Mir-455-v1
Cpi-Mir-455-v1
Cpo-Mir-455-v1
Dno-Mir-455-v1
Ebu-Mir-455-v1
Eca-Mir-455-v1
Ete-Mir-455-v1
Gga-Mir-455-v1
Gja-Mir-455
Hsa-Mir-455-v1
Lch-Mir-455
Loc-Mir-455-v1
Mdo-Mir-455-v1
Mml-Mir-455-v1
Mmr-Mir-455-v1
Mmu-Mir-455-v1
Mun-Mir-455
Oan-Mir-455-v1
Ocu-Mir-455-v1
Pab-Mir-455-v1
Pbv-Mir-455
Pma-Mir-455
Rno-Mir-455-v1
Sha-Mir-455-v1
Spt-Mir-455
Sto-Mir-455-v1
Tgu-Mir-455-v1
Xtr-Mir-455
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Vertebrata
|
Genome context (GCA_000001905.1_Loxafr3.0) |
GL010033.1: 45711168-45711225 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAGCACCCGCGCCCUUCCCUGGCGUGAGGGUAUGUGCCUUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGCCUAUGUCAACGAGGAGC
Get precursor sequence
|
Structure | 10 20 30 40 50
AAGCACCCGCGCCCUUC- -| C UG G U A C UGGAA
CC UGG G AG GUAUGUGCCU UGGACU CAU G G
GG ACU C UC CAUAUACGGG ACCUGA GUA C C
CGAGGAGCAACUGUAUCC A^ C GU A U C C ACGAC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Laf-Mir-455-v1_5p |
mirBase accession | None |
Sequence |
0- UAUGUGCCUUUGGACUACAUCG -22
Get sequence
|
Star sequence |
Laf-Mir-455-v1_3p* |
mirBase accession | None |
Sequence |
36- AUGCAGUCCAUGGGCAUAUACA -58
Get sequence
|