| MirGeneDB ID | Cja-Mir-455-v1 |
|---|---|
| Family name | MIR-455 (all species) |
| Seed | AUGUGCC |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-455-v2 Cja-Mir-455-v3 |
| Orthologues | Aca-Mir-455-v1 Ami-Mir-455-v1 Bta-Mir-455-v1 Cfa-Mir-455-v1 Cli-Mir-455-v1 Cmi-Mir-455-v1 Cpi-Mir-455-v1 Cpo-Mir-455-v1 Dno-Mir-455-v1 Ebu-Mir-455-v1 Eca-Mir-455-v1 Ete-Mir-455-v1 Gga-Mir-455-v1 Gja-Mir-455 Hsa-Mir-455-v1 Laf-Mir-455-v1 Lch-Mir-455 Loc-Mir-455-v1 Mdo-Mir-455-v1 Mml-Mir-455-v1 Mmr-Mir-455-v1 Mmu-Mir-455-v1 Mun-Mir-455 Oan-Mir-455-v1 Ocu-Mir-455-v1 Pab-Mir-455-v1 Pbv-Mir-455 Pma-Mir-455 Rno-Mir-455-v1 Sha-Mir-455-v1 Spt-Mir-455 Sto-Mir-455-v1 Tgu-Mir-455-v1 Xtr-Mir-455 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021915.1: 159540390-159540447 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GAGCACCCGCGCCCUUCCCUGGCGUGAGGGUAUGUGCCUUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGCCUAUGUCAUCGAGGAGCGet precursor sequence |
| Structure | 10 20 30 40 50 GAGCACCCGCGCCCUUC- -| C UG G U A C UGGAA CC UGG G AG GUAUGUGCCU UGGACU CAU G G GG ACU C UC CAUAUACGGG ACCUGA GUA C C CGAGGAGCUACUGUAUCC A^ C GU A U C C ACGAC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Cja-Mir-455-v1_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UAUGUGCCUUUGGACUACAUCG -22
Get sequence
|
| Star sequence | Cja-Mir-455-v1_3p* (predicted) |
| mirBase accession | None |
| Sequence |
36- AUGCAGUCCAUGGGCAUAUACA -58
Get sequence
|
