MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-455-v1

Family name MIR-455 (all species)
Seed AUGUGCC
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-455
Paralogues Gga-Mir-455-v2  Gga-Mir-455-v3 
Orthologues Aca-Mir-455-v1  Ami-Mir-455-v1  Bta-Mir-455-v1  Cfa-Mir-455-v1  Cja-Mir-455-v1  Cli-Mir-455-v1  Cmi-Mir-455-v1  Cpi-Mir-455-v1  Cpo-Mir-455-v1  Dno-Mir-455-v1  Ebu-Mir-455-v1  Eca-Mir-455-v1  Ete-Mir-455-v1  Gja-Mir-455  Hsa-Mir-455-v1  Laf-Mir-455-v1  Lch-Mir-455  Loc-Mir-455-v1  Mdo-Mir-455-v1  Mml-Mir-455-v1  Mmr-Mir-455-v1  Mmu-Mir-455-v1  Mun-Mir-455  Oan-Mir-455-v1  Ocu-Mir-455-v1  Pab-Mir-455-v1  Pbv-Mir-455  Pma-Mir-455  Rno-Mir-455-v1  Sha-Mir-455-v1  Spt-Mir-455  Sto-Mir-455-v1  Tgu-Mir-455-v1  Xtr-Mir-455 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 17: 5073863-5073920 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-455-v1)		 Mir-455-v2 17: 5073862-5073921 [+] UCSC Ensembl
Mir-455-v3 17: 5073862-5073921 [+] UCSC Ensembl
Mir-455-v1 17: 5073863-5073920 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGGAAUUCUCCUGAUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGUUUAUUUCAUCAUGGCUG
Get precursor sequence
Structure
        10          20        30        40        50        
CCGGAAUUCUCCUGAUC-  -|  U UG  G          U      A   C UGGAA 
                  CC UGG G  AG GUAUGUGCCC UGGACU CAU G     G
                  GG ACU C  UC CAUAUACGGG ACCUGA GUA C     C
GUCGGUACUACUUUAUUU  A^  C GU  A          U      C   C ACGAC 
      110       100        90        80        70        60
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Ch He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-455-v1_5p
mirBase accessionMIMAT0003364
Sequence 
0- UAUGUGCCCUUGGACUACAUCG -22
Get sequence
Proposed targets TargetScanVert: gga-miR-455-5p
miRDB: MIMAT0003364
Star sequence

Gga-Mir-455-v1_3p*
mirBase accessionMIMAT0006788
Sequence 
36- AUGCAGUCCAUGGGCAUAUACA -58
Get sequence
Proposed targets TargetScanVert: gga-miR-455-3p
miRDB: MIMAT0006788