MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-455-v2

Family name MIR-455 (all species)
Seed CAGUCCA
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-455
Paralogues Gga-Mir-455-v1  Gga-Mir-455-v3 
Orthologues Aca-Mir-455-v2  Ami-Mir-455-v2  Bta-Mir-455-v2  Cfa-Mir-455-v2  Cja-Mir-455-v2  Cli-Mir-455-v2  Cmi-Mir-455-v2  Cpi-Mir-455-v2  Cpo-Mir-455-v2  Dno-Mir-455-v2  Ebu-Mir-455-v2  Eca-Mir-455-v2  Ete-Mir-455-v2  Gja-Mir-455  Hsa-Mir-455-v2  Laf-Mir-455-v2  Lch-Mir-455  Loc-Mir-455-v2  Mdo-Mir-455-v2  Mml-Mir-455-v2  Mmr-Mir-455-v2  Mmu-Mir-455-v2  Mun-Mir-455  Oan-Mir-455-v2  Ocu-Mir-455-v2  Pab-Mir-455-v2  Pbv-Mir-455  Pma-Mir-455  Rno-Mir-455-v2  Sha-Mir-455-v2  Spt-Mir-455  Sto-Mir-455-v2  Tgu-Mir-455-v2  Xtr-Mir-455 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 17: 5073862-5073921 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-455-v2)		 Mir-455-v2 17: 5073862-5073921 [+] UCSC Ensembl
Mir-455-v3 17: 5073862-5073921 [+] UCSC Ensembl
Mir-455-v1 17: 5073863-5073920 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCGGAAUUCUCCUGAUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGUUUAUUUCAUCAUGGCUGC
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Structure
        10          20        30        40        50         
CCCGGAAUUCUCCUGAU--| C   U UG  G          U      A   CGUGGAA 
                   CC UGG G  AG GUAUGUGCCC UGGACU CAU       G
                   GG ACU C  UC CAUAUACGGG ACCUGA GUA       C
CGUCGGUACUACUUUAUUU^ A   C GU  A          U      C   CCACGAC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-455-v2_5p*
mirBase accessionMIMAT0003364
Sequence 
0- GUAUGUGCCCUUGGACUACAU -21
Get sequence
Proposed targets TargetScanVert: gga-miR-455-5p
miRDB: MIMAT0003364
Mature sequence

Gga-Mir-455-v2_3p
mirBase accessionMIMAT0006788
Sequence 
39- GCAGUCCAUGGGCAUAUACAC -60
Get sequence
Proposed targets TargetScanVert: gga-miR-455-3p
miRDB: MIMAT0006788