MirGeneDB 3.0
MirGeneDB ID

Cli-Mir-455-v2

Family name MIR-455 (all species)
Seed CAGUCCA
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-455
Paralogues Cli-Mir-455-v1  Cli-Mir-455-v3 
Orthologues Aca-Mir-455-v2  Ami-Mir-455-v2  Bta-Mir-455-v2  Cfa-Mir-455-v2  Cja-Mir-455-v2  Cmi-Mir-455-v2  Cpi-Mir-455-v2  Cpo-Mir-455-v2  Dno-Mir-455-v2  Ebu-Mir-455-v2  Eca-Mir-455-v2  Ete-Mir-455-v2  Gga-Mir-455-v2  Gja-Mir-455  Hsa-Mir-455-v2  Laf-Mir-455-v2  Lch-Mir-455  Loc-Mir-455-v2  Mdo-Mir-455-v2  Mml-Mir-455-v2  Mmr-Mir-455-v2  Mmu-Mir-455-v2  Mun-Mir-455  Oan-Mir-455-v2  Ocu-Mir-455-v2  Pab-Mir-455-v2  Pbv-Mir-455  Pma-Mir-455  Rno-Mir-455-v2  Sha-Mir-455-v2  Spt-Mir-455  Sto-Mir-455-v2  Tgu-Mir-455-v2  Xtr-Mir-455 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(colLiv2)		 scaffold955: 271162-271221 [-]
Clustered miRNAs
(< 50kb from Mir-455-v2)		 Mir-455-v2 scaffold955: 271162-271221 [-]
Mir-455-v3 scaffold955: 271162-271221 [-]
Mir-455-v1 scaffold955: 271163-271220 [-]
Precursor
(pre-Mir +30nt flank)
CCCGGAGUCCUCAUGAUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGUUUAUUUCUUCACGGCUGC
Get precursor sequence
Structure
        10          20        30        40        50         
CCCGGAGUCCUCAUGAU--| C   U UG  G          U      A   CGUGGAA 
                   CC UGG G  AG GUAUGUGCCC UGGACU CAU       G
                   GG ACU C  UC CAUAUACGGG ACCUGA GUA       C
CGUCGGCACUUCUUUAUUU^ A   C GU  A          U      C   CCACGAC 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsNo
Tissue expression
-   +
Li Mi Ov Pe Te To
Star sequence

Cli-Mir-455-v2_5p*
mirBase accessionMIMAT0038646
Sequence 
0- GUAUGUGCCCUUGGACUACAU -21
Get sequence
Mature sequence

Cli-Mir-455-v2_3p
mirBase accessionMIMAT0038647
Sequence 
39- GCAGUCCAUGGGCAUAUACAC -60
Get sequence