MirGeneDB ID | Dno-Mir-455-v1 |
---|---|
Family name | MIR-455 (all species) |
Seed | AUGUGCC |
Species | Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID | dno-mir-455 |
Paralogues | Dno-Mir-455-v2 Dno-Mir-455-v3 |
Orthologues | Aca-Mir-455-v1 Ami-Mir-455-v1 Bta-Mir-455-v1 Cfa-Mir-455-v1 Cja-Mir-455-v1 Cli-Mir-455-v1 Cmi-Mir-455-v1 Cpi-Mir-455-v1 Cpo-Mir-455-v1 Ebu-Mir-455-v1 Eca-Mir-455-v1 Ete-Mir-455-v1 Gga-Mir-455-v1 Gja-Mir-455 Hsa-Mir-455-v1 Laf-Mir-455-v1 Lch-Mir-455 Loc-Mir-455-v1 Mdo-Mir-455-v1 Mml-Mir-455-v1 Mmr-Mir-455-v1 Mmu-Mir-455-v1 Mun-Mir-455 Oan-Mir-455-v1 Ocu-Mir-455-v1 Pab-Mir-455-v1 Pbv-Mir-455 Pma-Mir-455 Rno-Mir-455-v1 Sha-Mir-455-v1 Spt-Mir-455 Sto-Mir-455-v1 Tgu-Mir-455-v1 Xtr-Mir-455 |
Node of Origin (locus) | Vertebrata |
Node of Origin (family) | Vertebrata |
Genome context (dasNov3) |
JH570314: 1028610-1028667 [+] UCSC Ensembl |
Clustered miRNAs (< 50kb from Mir-455-v1) |
Mir-455-v2
JH570314: 1028609-1028668 [+]
UCSC
Ensembl
Mir-455-v3 JH570314: 1028609-1028668 [+] UCSC Ensembl Mir-455-v1 JH570314: 1028610-1028667 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CAAGUGCCCCACCCUUCCCUGGCGUGAGGGUAUGUGCCUUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCGUGGGCAUAUACACUUGCCUCAAGGCCUAAGUCAUCGAGGAGUGet precursor sequence |
Structure | 10 20 30 40 50 CAAGUGCCCCACCCUUC- -| C UG G U A C UGGAA CC UGG G AG GUAUGUGCCU UGGACU CAU G G GG ACU C UC CAUAUACGGG GCCUGA GUA C C UGAGGAGCUACUGAAUCC A^ C GU A U C C ACGAC 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Mature sequence | Dno-Mir-455-v1_5p |
mirBase accession | MIMAT0047906 |
Sequence |
0- UAUGUGCCUUUGGACUACAUCG -22
Get sequence
|
Star sequence | Dno-Mir-455-v1_3p* |
mirBase accession | MIMAT0047907 |
Sequence |
36- AUGCAGUCCGUGGGCAUAUACA -58
Get sequence
|