MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-455-v1

Family name MIR-455 (all species)
Seed AUGUGCC
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-455-v2  Loc-Mir-455-v3 
Orthologues Aca-Mir-455-v1  Ami-Mir-455-v1  Bta-Mir-455-v1  Cfa-Mir-455-v1  Cja-Mir-455-v1  Cli-Mir-455-v1  Cmi-Mir-455-v1  Cpi-Mir-455-v1  Cpo-Mir-455-v1  Dno-Mir-455-v1  Ebu-Mir-455-v1  Eca-Mir-455-v1  Ete-Mir-455-v1  Gga-Mir-455-v1  Gja-Mir-455  Hsa-Mir-455-v1  Laf-Mir-455-v1  Lch-Mir-455  Mdo-Mir-455-v1  Mml-Mir-455-v1  Mmr-Mir-455-v1  Mmu-Mir-455-v1  Mun-Mir-455  Oan-Mir-455-v1  Ocu-Mir-455-v1  Pab-Mir-455-v1  Pbv-Mir-455  Pma-Mir-455  Rno-Mir-455-v1  Sha-Mir-455-v1  Spt-Mir-455  Sto-Mir-455-v1  Tgu-Mir-455-v1  Xtr-Mir-455 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)		 LG21: 4558780-4558837 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GGACAACUCCAUUGAUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGCUUAGUUCUUCACGGAGA
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Structure
        10          20        30        40        50        
GGACAACUCCAUUGAUC-  -|  U UG  G          U      A   C UGGAA 
                  CC UGG G  AG GUAUGUGCCC UGGACU CAU G     G
                  GG ACU C  UC CAUAUACGGG ACCUGA GUA C     C
AGAGGCACUUCUUGAUUC  A^  C GU  A          U      C   C ACGAC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Mature sequence

Loc-Mir-455-v1_5p
mirBase accessionNone
Sequence 
0- UAUGUGCCCUUGGACUACAUCG -22
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Star sequence

Loc-Mir-455-v1_3p*
mirBase accessionNone
Sequence 
36- AUGCAGUCCAUGGGCAUAUACA -58
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