MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-455-P1-v2

Family name MIR-455 (all species)
Seed CAGUCCA
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-455-1
Paralogues Dre-Mir-455-P1-v1  Dre-Mir-455-P1-v3  Dre-Mir-455-P2-v1  Dre-Mir-455-P2-v2  Dre-Mir-455-P2-v3 
Orthologues Gja-Mir-455  Gmo-Mir-455-P1-v1  Gmo-Mir-455-P1-v2  Gmo-Mir-455-P1-v3  Lch-Mir-455  Mal-Mir-455-P1-v1  Mal-Mir-455-P1-v2  Mal-Mir-455-P1-v3  Mun-Mir-455  Pbv-Mir-455  Pma-Mir-455  Spt-Mir-455  Tni-Mir-455-P1-v1  Tni-Mir-455-P1-v2  Tni-Mir-455-P1-v3  Xtr-Mir-455 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr5: 65250401-65250460 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-455-P1-v2)		 Mir-455-P1-v2 chr5: 65250401-65250460 [-] UCSC Ensembl
Mir-455-P1-v3 chr5: 65250401-65250460 [-] UCSC Ensembl
Mir-455-P1-v1 chr5: 65250402-65250459 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGAAUGCCCGUGUGAUCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGCCUAGAUCUUCACCGAGCG
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Structure
        10          20        30        40        50         
CCGAAUGCCCGUGUGAU--| C   U UG  G          U      A   CGUGGAA 
                   CC UGG G  AG GUAUGUGCCC UGGACU CAU       G
                   GG ACU C  UC CAUAUACGGG ACCUGA GUA       C
GCGAGCCACUUCUAGAUCC^ A   C GU  A          U      C   CCACGAC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-455-P1-v2_5p*
mirBase accessionMIMAT0001879
Sequence 
0- GUAUGUGCCCUUGGACUACAU -21
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Proposed targets TargetScanFish: dre-miR-455
Mature sequence

Dre-Mir-455-P1-v2_3p
mirBase accessionMIMAT0031993
Sequence 
39- GCAGUCCAUGGGCAUAUACAC -60
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