MirGeneDB 3.0
21 microRNA genes with seed CCAGUGU
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Pma-Mir-199-o1 pma-mir-199a MIR-199 CCAGUGU MIMAT0019505 MIMAT0019506 NC_046090.1 4834920 4834980 + P. marinus Vertebrata No 1 1
Pma-Mir-199-o3 None MIR-199 CCAGUGU None None NC_046127.1 1016358 1016419 + P. marinus Vertebrata Unknown 1
Cja-Mir-199-P1-v1 None MIR-199 CCAGUGU None None CM021932.1 24123359 24123419 + Gnathostomata Vertebrata No 1
Loc-Mir-199-P1-v1 None MIR-199 CCAGUGU None None LG10 26292830 26292890 - Gnathostomata Vertebrata No 1
Cja-Mir-199-P1-v2 None MIR-199 CCAGUGU None None CM021932.1 24123359 24123419 + Gnathostomata Vertebrata No 1
Cja-Mir-199-P1-v3 None MIR-199 CCAGUGU None None CM021932.1 24123359 24123419 + Gnathostomata Vertebrata No 1
Cja-Mir-199-P2-v1 None MIR-199 CCAGUGU None None CM021915.1 173904910 173904970 - Gnathostomata Vertebrata No
Loc-Mir-199-P2-v1 None MIR-199 CCAGUGU None None LG21 12007937 12007997 - Gnathostomata Vertebrata No
Cja-Mir-199-P2-v2 None MIR-199 CCAGUGU None None CM021915.1 173904910 173904970 - Gnathostomata Vertebrata No
Cja-Mir-199-P2-v3 None MIR-199 CCAGUGU None None CM021915.1 173904910 173904970 - Gnathostomata Vertebrata No
Xtr-Mir-199-P3 xtr-mir-199b MIR-199 CCAGUGU MIMAT0003692 None chr3 127964118 127964178 - Gnathostomata Vertebrata No 1
Cja-Mir-199-P3-v1 None MIR-199 CCAGUGU None None CM021936.1 9634758 9634820 - Gnathostomata Vertebrata No 1
Loc-Mir-199-P3-v1 None MIR-199 CCAGUGU None None LG6 19340903 19340963 + Gnathostomata Vertebrata No 1
Cja-Mir-199-P3-v2 None MIR-199 CCAGUGU None None CM021936.1 9634758 9634820 - Gnathostomata Vertebrata No 1
Cja-Mir-199-P3-v3 None MIR-199 CCAGUGU None None CM021936.1 9634758 9634820 - Gnathostomata Vertebrata No 1
Xla-Mir-199-P3a None MIR-199 CCAGUGU None None NC_030728.1 132099453 132099513 - X. laevis Vertebrata No 1
Xla-Mir-199-P3b None MIR-199 CCAGUGU None None NW_016694811.1 452651 452711 - X. laevis Vertebrata No 1
Ebu-Mir-199-P5 None MIR-199 CCAGUGU None None FYBX02009869.1 649889 649949 + E. burgeri Vertebrata No 1 1
Ebu-Mir-199-P6 None MIR-199 CCAGUGU None None FYBX02009521.1 561808 561868 + E. burgeri Vertebrata No 1
Ebu-Mir-338-P3 None MIR-338 CCAGUGU None None FYBX02010050.1 36039 36101 + Cyclostomata Vertebrata No 1
Pma-Mir-338-P3 pma-mir-338b MIR-338 CCAGUGU None MIMAT0019540 NC_046071.1 19740631 19740695 + Cyclostomata Vertebrata No

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